Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.72■□□□□ 0.75
TNFP01375 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TNFP01375 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TNFP01375 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.72■□□□□ 0.75
TNFP01375 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TNFP01375 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
TNFP01375 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.72■□□□□ 0.75
TNFP01375 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFP01375 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFP01375 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
TNFP01375 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFP01375 AL121603.2-201ENST00000557373 2117 ntBASIC19.72■□□□□ 0.75
TNFP01375 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.72■□□□□ 0.75
TNFP01375 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFP01375 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFP01375 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TNFP01375 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TNFP01375 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFP01375 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.71■□□□□ 0.75
TNFP01375 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TNFP01375 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFP01375 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.71■□□□□ 0.75
TNFP01375 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.71■□□□□ 0.75
TNFP01375 AL121829.2-201ENST00000620908 328 ntBASIC19.71■□□□□ 0.75
TNFP01375 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TNFP01375 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TNFP01375 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TNFP01375 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.71■□□□□ 0.75
TNFP01375 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFP01375 KRT8P20-201ENST00000423953 1409 ntBASIC19.7■□□□□ 0.74
TNFP01375 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNFP01375 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFP01375 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFP01375 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TNFP01375 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TNFP01375 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.7■□□□□ 0.74
TNFP01375 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFP01375 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.7■□□□□ 0.74
TNFP01375 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFP01375 Z99916.2-201ENST00000604037 246 ntBASIC19.7■□□□□ 0.74
TNFP01375 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.7■□□□□ 0.74
TNFP01375 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFP01375 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
TNFP01375 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TNFP01375 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFP01375 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.7■□□□□ 0.74
TNFP01375 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TNFP01375 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TNFP01375 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFP01375 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFP01375 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TNFP01375 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.69■□□□□ 0.74
TNFP01375 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFP01375 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TNFP01375 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
TNFP01375 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.69■□□□□ 0.74
TNFP01375 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.69■□□□□ 0.74
TNFP01375 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.69■□□□□ 0.74
TNFP01375 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFP01375 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFP01375 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TNFP01375 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFP01375 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFP01375 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.68■□□□□ 0.74
TNFP01375 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.68■□□□□ 0.74
TNFP01375 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFP01375 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.68■□□□□ 0.74
TNFP01375 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFP01375 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFP01375 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFP01375 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TNFP01375 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TNFP01375 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFP01375 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFP01375 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFP01375 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFP01375 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFP01375 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFP01375 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFP01375 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TNFP01375 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFP01375 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFP01375 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TNFP01375 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFP01375 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.67■□□□□ 0.74
TNFP01375 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFP01375 AL031963.3-201ENST00000606441 850 ntBASIC19.67■□□□□ 0.74
TNFP01375 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.67■□□□□ 0.74
TNFP01375 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.67■□□□□ 0.74
TNFP01375 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFP01375 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFP01375 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.67■□□□□ 0.74
TNFP01375 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.67■□□□□ 0.74
TNFP01375 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFP01375 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TNFP01375 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TNFP01375 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.66■□□□□ 0.74
TNFP01375 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFP01375 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TNFP01375 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms