Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PPP1R3DO95685 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PPP1R3DO95685 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.16■□□□□ 0.5
PPP1R3DO95685 AC125437.2-201ENST00000625180 2167 ntBASIC18.16■□□□□ 0.5
PPP1R3DO95685 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
PPP1R3DO95685 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PPP1R3DO95685 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PPP1R3DO95685 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PPP1R3DO95685 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PPP1R3DO95685 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PPP1R3DO95685 AC097381.1-201ENST00000429019 1296 ntBASIC18.16■□□□□ 0.5
PPP1R3DO95685 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.16■□□□□ 0.5
PPP1R3DO95685 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PPP1R3DO95685 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PPP1R3DO95685 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PPP1R3DO95685 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.16■□□□□ 0.5
PPP1R3DO95685 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PPP1R3DO95685 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PPP1R3DO95685 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.16■□□□□ 0.5
PPP1R3DO95685 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PPP1R3DO95685 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PPP1R3DO95685 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PPP1R3DO95685 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PPP1R3DO95685 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PPP1R3DO95685 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PPP1R3DO95685 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PPP1R3DO95685 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PPP1R3DO95685 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PPP1R3DO95685 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PPP1R3DO95685 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PPP1R3DO95685 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.15■□□□□ 0.5
PPP1R3DO95685 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PPP1R3DO95685 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PPP1R3DO95685 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PPP1R3DO95685 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PPP1R3DO95685 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
PPP1R3DO95685 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PPP1R3DO95685 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.15■□□□□ 0.5
PPP1R3DO95685 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PPP1R3DO95685 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PPP1R3DO95685 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.15■□□□□ 0.5
PPP1R3DO95685 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.15■□□□□ 0.5
PPP1R3DO95685 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.15■□□□□ 0.5
PPP1R3DO95685 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PPP1R3DO95685 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PPP1R3DO95685 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.15■□□□□ 0.5
PPP1R3DO95685 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PPP1R3DO95685 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PPP1R3DO95685 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PPP1R3DO95685 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PPP1R3DO95685 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PPP1R3DO95685 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PPP1R3DO95685 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PPP1R3DO95685 AL691432.2-201ENST00000607222 2038 ntBASIC18.15■□□□□ 0.5
PPP1R3DO95685 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PPP1R3DO95685 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.14■□□□□ 0.5
PPP1R3DO95685 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PPP1R3DO95685 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.14■□□□□ 0.5
PPP1R3DO95685 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.14■□□□□ 0.5
PPP1R3DO95685 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
PPP1R3DO95685 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PPP1R3DO95685 BX119927.1-201ENST00000636596 1552 ntBASIC18.14■□□□□ 0.49
PPP1R3DO95685 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PPP1R3DO95685 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PPP1R3DO95685 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.14■□□□□ 0.49
PPP1R3DO95685 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PPP1R3DO95685 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.14■□□□□ 0.49
PPP1R3DO95685 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PPP1R3DO95685 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
PPP1R3DO95685 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.14■□□□□ 0.49
PPP1R3DO95685 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PPP1R3DO95685 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PPP1R3DO95685 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PPP1R3DO95685 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PPP1R3DO95685 AL158211.5-201ENST00000623583 2518 ntBASIC18.14■□□□□ 0.49
PPP1R3DO95685 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.14■□□□□ 0.49
PPP1R3DO95685 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.14■□□□□ 0.49
PPP1R3DO95685 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PPP1R3DO95685 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.14■□□□□ 0.49
PPP1R3DO95685 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.14■□□□□ 0.49
PPP1R3DO95685 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PPP1R3DO95685 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PPP1R3DO95685 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PPP1R3DO95685 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
PPP1R3DO95685 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
PPP1R3DO95685 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PPP1R3DO95685 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PPP1R3DO95685 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PPP1R3DO95685 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.13■□□□□ 0.49
PPP1R3DO95685 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PPP1R3DO95685 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PPP1R3DO95685 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.13■□□□□ 0.49
PPP1R3DO95685 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.13■□□□□ 0.49
PPP1R3DO95685 AL356652.1-201ENST00000615962 565 ntBASIC18.13■□□□□ 0.49
PPP1R3DO95685 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.13■□□□□ 0.49
PPP1R3DO95685 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PPP1R3DO95685 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
PPP1R3DO95685 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PPP1R3DO95685 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PPP1R3DO95685 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms