Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PCF11O94913 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
PCF11O94913 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC31.63■■■□□ 2.65
PCF11O94913 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC31.63■■■□□ 2.65
PCF11O94913 SNX21-213ENST00000614929 587 ntTSL 5 BASIC31.63■■■□□ 2.65
PCF11O94913 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC31.63■■■□□ 2.65
PCF11O94913 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
PCF11O94913 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
PCF11O94913 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PCF11O94913 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC31.63■■■□□ 2.65
PCF11O94913 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
PCF11O94913 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
PCF11O94913 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC31.62■■■□□ 2.65
PCF11O94913 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
PCF11O94913 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC31.61■■■□□ 2.65
PCF11O94913 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC31.61■■■□□ 2.65
PCF11O94913 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
PCF11O94913 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
PCF11O94913 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC31.61■■■□□ 2.65
PCF11O94913 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
PCF11O94913 PRKY-204ENST00000533551 1019 ntBASIC31.61■■■□□ 2.65
PCF11O94913 AC133561.5-201ENST00000635547 218 ntBASIC31.61■■■□□ 2.65
PCF11O94913 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC31.61■■■□□ 2.65
PCF11O94913 AL135905.2-201ENST00000584934 1404 ntBASIC31.61■■■□□ 2.65
PCF11O94913 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PCF11O94913 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC31.61■■■□□ 2.65
PCF11O94913 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
PCF11O94913 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PCF11O94913 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PCF11O94913 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC31.6■■■□□ 2.65
PCF11O94913 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC31.6■■■□□ 2.65
PCF11O94913 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
PCF11O94913 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
PCF11O94913 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
PCF11O94913 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC31.6■■■□□ 2.65
PCF11O94913 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
PCF11O94913 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PCF11O94913 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC31.6■■■□□ 2.65
PCF11O94913 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
PCF11O94913 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
PCF11O94913 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
PCF11O94913 AC087499.1-201ENST00000418141 1075 ntBASIC31.6■■■□□ 2.65
PCF11O94913 TSPY15P-201ENST00000457163 923 ntBASIC31.6■■■□□ 2.65
PCF11O94913 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC31.6■■■□□ 2.65
PCF11O94913 MIR4785-201ENST00000585005 73 ntBASIC31.6■■■□□ 2.65
PCF11O94913 AC097493.4-201ENST00000641197 219 ntBASIC31.6■■■□□ 2.65
PCF11O94913 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC31.6■■■□□ 2.65
PCF11O94913 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PCF11O94913 NT5C-211ENST00000582170 653 ntTSL 3 BASIC31.59■■■□□ 2.65
PCF11O94913 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
PCF11O94913 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PCF11O94913 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PCF11O94913 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PCF11O94913 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PCF11O94913 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
PCF11O94913 WWC2-AS2-201ENST00000578387 2183 ntBASIC31.58■■■□□ 2.65
PCF11O94913 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC31.58■■■□□ 2.65
PCF11O94913 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PCF11O94913 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PCF11O94913 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PCF11O94913 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
PCF11O94913 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
PCF11O94913 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC31.57■■■□□ 2.65
PCF11O94913 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
PCF11O94913 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC31.57■■■□□ 2.64
PCF11O94913 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC31.57■■■□□ 2.64
PCF11O94913 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
PCF11O94913 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC31.57■■■□□ 2.64
PCF11O94913 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC31.57■■■□□ 2.64
PCF11O94913 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC31.56■■■□□ 2.64
PCF11O94913 KRT16P5-201ENST00000455284 522 ntBASIC31.56■■■□□ 2.64
PCF11O94913 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC31.56■■■□□ 2.64
PCF11O94913 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC31.56■■■□□ 2.64
PCF11O94913 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC31.56■■■□□ 2.64
PCF11O94913 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
PCF11O94913 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PCF11O94913 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PCF11O94913 NBPF21P-201ENST00000425093 1451 ntBASIC31.56■■■□□ 2.64
PCF11O94913 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
PCF11O94913 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC31.56■■■□□ 2.64
PCF11O94913 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
PCF11O94913 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PCF11O94913 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
PCF11O94913 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC31.56■■■□□ 2.64
PCF11O94913 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC31.56■■■□□ 2.64
PCF11O94913 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC31.56■■■□□ 2.64
PCF11O94913 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC31.56■■■□□ 2.64
PCF11O94913 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
PCF11O94913 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC31.56■■■□□ 2.64
PCF11O94913 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
PCF11O94913 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
PCF11O94913 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
PCF11O94913 ERF-202ENST00000440177 2032 ntTSL 2 BASIC31.55■■■□□ 2.64
PCF11O94913 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC31.55■■■□□ 2.64
PCF11O94913 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC31.55■■■□□ 2.64
PCF11O94913 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC31.54■■■□□ 2.64
PCF11O94913 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
PCF11O94913 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PCF11O94913 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC31.54■■■□□ 2.64
PCF11O94913 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC31.54■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms