Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPP40O75818 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPP40O75818 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPP40O75818 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RPP40O75818 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPP40O75818 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.66■□□□□ 0.9
RPP40O75818 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPP40O75818 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RPP40O75818 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.66■□□□□ 0.9
RPP40O75818 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPP40O75818 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.66■□□□□ 0.9
RPP40O75818 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.66■□□□□ 0.9
RPP40O75818 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.66■□□□□ 0.9
RPP40O75818 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPP40O75818 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPP40O75818 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.66■□□□□ 0.9
RPP40O75818 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPP40O75818 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPP40O75818 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
RPP40O75818 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPP40O75818 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPP40O75818 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RPP40O75818 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.65■□□□□ 0.9
RPP40O75818 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPP40O75818 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
RPP40O75818 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RPP40O75818 CYP21A1P-202ENST00000354927 1481 ntBASIC20.65■□□□□ 0.9
RPP40O75818 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.65■□□□□ 0.9
RPP40O75818 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPP40O75818 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RPP40O75818 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.65■□□□□ 0.9
RPP40O75818 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.65■□□□□ 0.9
RPP40O75818 AP001412.1-201ENST00000608405 714 ntBASIC20.65■□□□□ 0.9
RPP40O75818 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPP40O75818 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.65■□□□□ 0.9
RPP40O75818 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RPP40O75818 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
RPP40O75818 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RPP40O75818 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RPP40O75818 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.64■□□□□ 0.9
RPP40O75818 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPP40O75818 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPP40O75818 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPP40O75818 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPP40O75818 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPP40O75818 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPP40O75818 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
RPP40O75818 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
RPP40O75818 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPP40O75818 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPP40O75818 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.64■□□□□ 0.89
RPP40O75818 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.64■□□□□ 0.89
RPP40O75818 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPP40O75818 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPP40O75818 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
RPP40O75818 AC105020.6-201ENST00000621523 1217 ntBASIC20.64■□□□□ 0.89
RPP40O75818 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
RPP40O75818 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPP40O75818 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPP40O75818 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RPP40O75818 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPP40O75818 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPP40O75818 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPP40O75818 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPP40O75818 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPP40O75818 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPP40O75818 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPP40O75818 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPP40O75818 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPP40O75818 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPP40O75818 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPP40O75818 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPP40O75818 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPP40O75818 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPP40O75818 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPP40O75818 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPP40O75818 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RPP40O75818 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.63■□□□□ 0.89
RPP40O75818 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.63■□□□□ 0.89
RPP40O75818 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.63■□□□□ 0.89
RPP40O75818 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.63■□□□□ 0.89
RPP40O75818 AL049637.2-201ENST00000641778 930 ntBASIC20.63■□□□□ 0.89
RPP40O75818 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPP40O75818 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.63■□□□□ 0.89
RPP40O75818 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPP40O75818 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPP40O75818 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPP40O75818 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RPP40O75818 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RPP40O75818 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.62■□□□□ 0.89
RPP40O75818 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.62■□□□□ 0.89
RPP40O75818 AC116050.2-201ENST00000612102 1779 ntBASIC20.62■□□□□ 0.89
RPP40O75818 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPP40O75818 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPP40O75818 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPP40O75818 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.62■□□□□ 0.89
RPP40O75818 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPP40O75818 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPP40O75818 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.62■□□□□ 0.89
RPP40O75818 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms