Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNRNP200O75643 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRNP200O75643 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRNP200O75643 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRNP200O75643 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SNRNP200O75643 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRNP200O75643 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SNRNP200O75643 DPP3P2-201ENST00000416030 1696 ntBASIC19.3■□□□□ 0.68
SNRNP200O75643 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.3■□□□□ 0.68
SNRNP200O75643 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNRNP200O75643 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRNP200O75643 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.3■□□□□ 0.68
SNRNP200O75643 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNRNP200O75643 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.3■□□□□ 0.68
SNRNP200O75643 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNRNP200O75643 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SNRNP200O75643 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.3■□□□□ 0.68
SNRNP200O75643 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SNRNP200O75643 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRNP200O75643 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.3■□□□□ 0.68
SNRNP200O75643 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNRNP200O75643 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.3■□□□□ 0.68
SNRNP200O75643 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.3■□□□□ 0.68
SNRNP200O75643 PRORSD1P-201ENST00000295112 541 ntBASIC19.3■□□□□ 0.68
SNRNP200O75643 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.3■□□□□ 0.68
SNRNP200O75643 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.3■□□□□ 0.68
SNRNP200O75643 RPS2P52-201ENST00000469610 820 ntBASIC19.3■□□□□ 0.68
SNRNP200O75643 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SNRNP200O75643 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.3■□□□□ 0.68
SNRNP200O75643 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.3■□□□□ 0.68
SNRNP200O75643 AC005829.2-201ENST00000571422 1056 ntBASIC19.3■□□□□ 0.68
SNRNP200O75643 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.3■□□□□ 0.68
SNRNP200O75643 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNRNP200O75643 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNRNP200O75643 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNRNP200O75643 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SNRNP200O75643 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNRNP200O75643 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.29■□□□□ 0.68
SNRNP200O75643 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SNRNP200O75643 HLA-B-256ENST00000639848 1089 ntBASIC19.29■□□□□ 0.68
SNRNP200O75643 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.29■□□□□ 0.68
SNRNP200O75643 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNRNP200O75643 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SNRNP200O75643 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNRNP200O75643 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNRNP200O75643 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNRNP200O75643 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SNRNP200O75643 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
SNRNP200O75643 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNRNP200O75643 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.28■□□□□ 0.68
SNRNP200O75643 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.28■□□□□ 0.68
SNRNP200O75643 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.28■□□□□ 0.68
SNRNP200O75643 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.28■□□□□ 0.68
SNRNP200O75643 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNRNP200O75643 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNRNP200O75643 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.28■□□□□ 0.68
SNRNP200O75643 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNRNP200O75643 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNRNP200O75643 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
SNRNP200O75643 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNRNP200O75643 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNRNP200O75643 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.28■□□□□ 0.68
SNRNP200O75643 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.28■□□□□ 0.68
SNRNP200O75643 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.28■□□□□ 0.68
SNRNP200O75643 AC092720.2-201ENST00000602388 1665 ntBASIC19.28■□□□□ 0.68
SNRNP200O75643 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.28■□□□□ 0.68
SNRNP200O75643 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNRNP200O75643 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.27■□□□□ 0.68
SNRNP200O75643 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.27■□□□□ 0.68
SNRNP200O75643 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.27■□□□□ 0.68
SNRNP200O75643 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SNRNP200O75643 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNRNP200O75643 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNRNP200O75643 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNRNP200O75643 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNRNP200O75643 ESRRAP1-201ENST00000400596 1257 ntBASIC19.27■□□□□ 0.68
SNRNP200O75643 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.27■□□□□ 0.68
SNRNP200O75643 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.27■□□□□ 0.68
SNRNP200O75643 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.27■□□□□ 0.68
SNRNP200O75643 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.27■□□□□ 0.68
SNRNP200O75643 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNRNP200O75643 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNRNP200O75643 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SNRNP200O75643 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNRNP200O75643 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNRNP200O75643 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.27■□□□□ 0.67
SNRNP200O75643 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SNRNP200O75643 AL691432.2-201ENST00000607222 2038 ntBASIC19.27■□□□□ 0.67
SNRNP200O75643 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.27■□□□□ 0.67
SNRNP200O75643 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.27■□□□□ 0.67
SNRNP200O75643 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNRNP200O75643 GABARAPL3-202ENST00000624044 1851 ntBASIC19.27■□□□□ 0.67
SNRNP200O75643 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNRNP200O75643 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNRNP200O75643 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNRNP200O75643 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.26■□□□□ 0.67
SNRNP200O75643 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNRNP200O75643 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNRNP200O75643 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNRNP200O75643 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms