Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AL691432.2-201ENST00000607222 2038 ntBASIC20.99■□□□□ 0.95
LRCH4O75427 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRCH4O75427 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.98■□□□□ 0.95
LRCH4O75427 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.98■□□□□ 0.95
LRCH4O75427 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRCH4O75427 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRCH4O75427 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRCH4O75427 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
LRCH4O75427 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRCH4O75427 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.98■□□□□ 0.95
LRCH4O75427 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.98■□□□□ 0.95
LRCH4O75427 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRCH4O75427 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.98■□□□□ 0.95
LRCH4O75427 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRCH4O75427 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
LRCH4O75427 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRCH4O75427 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH4O75427 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LRCH4O75427 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH4O75427 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.97■□□□□ 0.95
LRCH4O75427 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH4O75427 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH4O75427 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH4O75427 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.97■□□□□ 0.95
LRCH4O75427 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.97■□□□□ 0.95
LRCH4O75427 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.97■□□□□ 0.95
LRCH4O75427 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.97■□□□□ 0.95
LRCH4O75427 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.97■□□□□ 0.95
LRCH4O75427 AF201337.1-201ENST00000520239 748 ntBASIC20.97■□□□□ 0.95
LRCH4O75427 AC105036.2-201ENST00000569468 176 ntBASIC20.97■□□□□ 0.95
LRCH4O75427 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.97■□□□□ 0.95
LRCH4O75427 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.97■□□□□ 0.95
LRCH4O75427 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH4O75427 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH4O75427 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LRCH4O75427 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.97■□□□□ 0.95
LRCH4O75427 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
LRCH4O75427 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRCH4O75427 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH4O75427 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.96■□□□□ 0.95
LRCH4O75427 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH4O75427 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH4O75427 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.96■□□□□ 0.95
LRCH4O75427 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
LRCH4O75427 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH4O75427 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH4O75427 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRCH4O75427 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.96■□□□□ 0.95
LRCH4O75427 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
LRCH4O75427 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
LRCH4O75427 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH4O75427 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH4O75427 MKRN4P-201ENST00000444706 1521 ntBASIC20.95■□□□□ 0.94
LRCH4O75427 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH4O75427 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.95■□□□□ 0.94
LRCH4O75427 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH4O75427 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH4O75427 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.95■□□□□ 0.94
LRCH4O75427 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.95■□□□□ 0.94
LRCH4O75427 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
LRCH4O75427 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.95■□□□□ 0.94
LRCH4O75427 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.95■□□□□ 0.94
LRCH4O75427 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH4O75427 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH4O75427 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH4O75427 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH4O75427 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRCH4O75427 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.95■□□□□ 0.94
LRCH4O75427 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.94■□□□□ 0.94
LRCH4O75427 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH4O75427 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.94■□□□□ 0.94
LRCH4O75427 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.94■□□□□ 0.94
LRCH4O75427 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.94■□□□□ 0.94
LRCH4O75427 C2orf69P4-201ENST00000565394 541 ntBASIC20.94■□□□□ 0.94
LRCH4O75427 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.94■□□□□ 0.94
LRCH4O75427 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH4O75427 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.94■□□□□ 0.94
LRCH4O75427 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
LRCH4O75427 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.94■□□□□ 0.94
LRCH4O75427 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRCH4O75427 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH4O75427 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LRCH4O75427 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH4O75427 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH4O75427 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH4O75427 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.93■□□□□ 0.94
LRCH4O75427 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH4O75427 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.93■□□□□ 0.94
LRCH4O75427 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH4O75427 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH4O75427 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.93■□□□□ 0.94
LRCH4O75427 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH4O75427 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
LRCH4O75427 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.93■□□□□ 0.94
LRCH4O75427 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.93■□□□□ 0.94
LRCH4O75427 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH4O75427 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.93■□□□□ 0.94
LRCH4O75427 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRCH4O75427 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.93■□□□□ 0.94
LRCH4O75427 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms