Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM3O75382 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM3O75382 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM3O75382 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM3O75382 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM3O75382 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.71■□□□□ 0.59
TRIM3O75382 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM3O75382 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRIM3O75382 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM3O75382 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
TRIM3O75382 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM3O75382 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM3O75382 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRIM3O75382 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM3O75382 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM3O75382 DUSP5P2-201ENST00000426873 1033 ntBASIC18.7■□□□□ 0.58
TRIM3O75382 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM3O75382 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.7■□□□□ 0.58
TRIM3O75382 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM3O75382 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRIM3O75382 KRT18P6-201ENST00000555540 1265 ntBASIC18.7■□□□□ 0.58
TRIM3O75382 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM3O75382 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM3O75382 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM3O75382 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM3O75382 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRIM3O75382 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM3O75382 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM3O75382 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
TRIM3O75382 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
TRIM3O75382 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM3O75382 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM3O75382 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM3O75382 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM3O75382 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM3O75382 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM3O75382 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM3O75382 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM3O75382 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM3O75382 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM3O75382 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRIM3O75382 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM3O75382 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRIM3O75382 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM3O75382 AC097658.1-201ENST00000475555 843 ntBASIC18.69■□□□□ 0.58
TRIM3O75382 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
TRIM3O75382 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM3O75382 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM3O75382 AL589743.5-201ENST00000616611 1050 ntBASIC18.69■□□□□ 0.58
TRIM3O75382 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM3O75382 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRIM3O75382 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
TRIM3O75382 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
TRIM3O75382 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRIM3O75382 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM3O75382 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM3O75382 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM3O75382 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM3O75382 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM3O75382 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM3O75382 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM3O75382 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM3O75382 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM3O75382 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM3O75382 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM3O75382 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM3O75382 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRIM3O75382 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRIM3O75382 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM3O75382 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM3O75382 AC083880.1-201ENST00000608266 535 ntBASIC18.68■□□□□ 0.58
TRIM3O75382 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM3O75382 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRIM3O75382 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM3O75382 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM3O75382 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM3O75382 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRIM3O75382 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM3O75382 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRIM3O75382 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM3O75382 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM3O75382 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM3O75382 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM3O75382 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM3O75382 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM3O75382 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRIM3O75382 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM3O75382 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM3O75382 LINC01006-201ENST00000333319 2292 ntBASIC18.67■□□□□ 0.58
TRIM3O75382 AC087633.2-202ENST00000565166 1439 ntBASIC18.67■□□□□ 0.58
TRIM3O75382 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM3O75382 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM3O75382 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM3O75382 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRIM3O75382 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM3O75382 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM3O75382 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM3O75382 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM3O75382 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM3O75382 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms