Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNSO60931 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTNSO60931 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CTNSO60931 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNSO60931 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNSO60931 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNSO60931 KRT8P17-201ENST00000453110 1448 ntBASIC18.86■□□□□ 0.61
CTNSO60931 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNSO60931 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CTNSO60931 HLA-G-202ENST00000376815 851 ntBASIC18.86■□□□□ 0.61
CTNSO60931 HLA-G-203ENST00000376818 1127 ntBASIC18.86■□□□□ 0.61
CTNSO60931 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.86■□□□□ 0.61
CTNSO60931 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CTNSO60931 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.86■□□□□ 0.61
CTNSO60931 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.86■□□□□ 0.61
CTNSO60931 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.86■□□□□ 0.61
CTNSO60931 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNSO60931 PNMA6B-201ENST00000538162 1200 ntBASIC18.86■□□□□ 0.61
CTNSO60931 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNSO60931 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.86■□□□□ 0.61
CTNSO60931 AC005829.2-201ENST00000571422 1056 ntBASIC18.86■□□□□ 0.61
CTNSO60931 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTNSO60931 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNSO60931 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNSO60931 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.86■□□□□ 0.61
CTNSO60931 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNSO60931 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.86■□□□□ 0.61
CTNSO60931 SMG8-203ENST00000578922 2178 ntBASIC18.86■□□□□ 0.61
CTNSO60931 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNSO60931 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.86■□□□□ 0.61
CTNSO60931 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTNSO60931 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CTNSO60931 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNSO60931 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CTNSO60931 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNSO60931 KRT8P20-201ENST00000423953 1409 ntBASIC18.85■□□□□ 0.61
CTNSO60931 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNSO60931 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNSO60931 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNSO60931 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNSO60931 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNSO60931 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNSO60931 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTNSO60931 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTNSO60931 AL390719.1-204ENST00000412397 1219 ntBASIC18.85■□□□□ 0.61
CTNSO60931 RNA5SP413-201ENST00000516373 109 ntBASIC18.85■□□□□ 0.61
CTNSO60931 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.85■□□□□ 0.61
CTNSO60931 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.85■□□□□ 0.61
CTNSO60931 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.85■□□□□ 0.61
CTNSO60931 AL031963.3-201ENST00000606441 850 ntBASIC18.85■□□□□ 0.61
CTNSO60931 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNSO60931 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNSO60931 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNSO60931 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CTNSO60931 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.85■□□□□ 0.61
CTNSO60931 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CTNSO60931 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTNSO60931 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.85■□□□□ 0.61
CTNSO60931 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.85■□□□□ 0.61
CTNSO60931 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNSO60931 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNSO60931 AL157384.1-201ENST00000445995 2473 ntBASIC18.84■□□□□ 0.61
CTNSO60931 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.84■□□□□ 0.61
CTNSO60931 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.84■□□□□ 0.61
CTNSO60931 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTNSO60931 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNSO60931 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.84■□□□□ 0.61
CTNSO60931 LINC01006-201ENST00000333319 2292 ntBASIC18.84■□□□□ 0.61
CTNSO60931 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNSO60931 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNSO60931 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTNSO60931 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNSO60931 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.84■□□□□ 0.61
CTNSO60931 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CTNSO60931 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.84■□□□□ 0.61
CTNSO60931 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CTNSO60931 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.84■□□□□ 0.61
CTNSO60931 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.84■□□□□ 0.61
CTNSO60931 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNSO60931 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNSO60931 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTNSO60931 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.84■□□□□ 0.61
CTNSO60931 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.84■□□□□ 0.61
CTNSO60931 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CTNSO60931 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNSO60931 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTNSO60931 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CTNSO60931 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNSO60931 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNSO60931 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.84■□□□□ 0.61
CTNSO60931 AC092667.1-201ENST00000434301 2586 ntBASIC18.84■□□□□ 0.61
CTNSO60931 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.84■□□□□ 0.61
CTNSO60931 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.83■□□□□ 0.61
CTNSO60931 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTNSO60931 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CTNSO60931 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.83■□□□□ 0.61
CTNSO60931 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTNSO60931 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CTNSO60931 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.83■□□□□ 0.61
CTNSO60931 AC073130.3-201ENST00000624389 2278 ntBASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms