Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA3O60609 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA3O60609 HLA-G-203ENST00000376818 1127 ntBASIC19.73■□□□□ 0.75
GFRA3O60609 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA3O60609 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.73■□□□□ 0.75
GFRA3O60609 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA3O60609 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.73■□□□□ 0.75
GFRA3O60609 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA3O60609 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA3O60609 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.73■□□□□ 0.75
GFRA3O60609 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.73■□□□□ 0.75
GFRA3O60609 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.73■□□□□ 0.75
GFRA3O60609 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA3O60609 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.73■□□□□ 0.75
GFRA3O60609 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA3O60609 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA3O60609 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.72■□□□□ 0.75
GFRA3O60609 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GFRA3O60609 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GFRA3O60609 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GFRA3O60609 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GFRA3O60609 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
GFRA3O60609 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.72■□□□□ 0.75
GFRA3O60609 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.72■□□□□ 0.75
GFRA3O60609 CCR12P-201ENST00000446203 998 ntBASIC19.72■□□□□ 0.75
GFRA3O60609 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.72■□□□□ 0.75
GFRA3O60609 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.72■□□□□ 0.75
GFRA3O60609 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.72■□□□□ 0.75
GFRA3O60609 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
GFRA3O60609 AC008622.2-201ENST00000617006 1229 ntBASIC19.72■□□□□ 0.75
GFRA3O60609 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.72■□□□□ 0.75
GFRA3O60609 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
GFRA3O60609 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GFRA3O60609 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GFRA3O60609 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
GFRA3O60609 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GFRA3O60609 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GFRA3O60609 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GFRA3O60609 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GFRA3O60609 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GFRA3O60609 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GFRA3O60609 AC009078.2-202ENST00000463353 338 ntBASIC19.71■□□□□ 0.75
GFRA3O60609 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.71■□□□□ 0.75
GFRA3O60609 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.71■□□□□ 0.75
GFRA3O60609 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
GFRA3O60609 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GFRA3O60609 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GFRA3O60609 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.71■□□□□ 0.75
GFRA3O60609 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
GFRA3O60609 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GFRA3O60609 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
GFRA3O60609 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GFRA3O60609 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.7■□□□□ 0.74
GFRA3O60609 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GFRA3O60609 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
GFRA3O60609 AC140113.3-201ENST00000605663 199 ntBASIC19.7■□□□□ 0.74
GFRA3O60609 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.7■□□□□ 0.74
GFRA3O60609 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GFRA3O60609 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.7■□□□□ 0.74
GFRA3O60609 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.7■□□□□ 0.74
GFRA3O60609 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GFRA3O60609 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GFRA3O60609 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GFRA3O60609 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.69■□□□□ 0.74
GFRA3O60609 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
GFRA3O60609 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
GFRA3O60609 AC142381.3-201ENST00000568208 1670 ntBASIC19.69■□□□□ 0.74
GFRA3O60609 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GFRA3O60609 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GFRA3O60609 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.69■□□□□ 0.74
GFRA3O60609 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GFRA3O60609 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GFRA3O60609 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.69■□□□□ 0.74
GFRA3O60609 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.69■□□□□ 0.74
GFRA3O60609 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
GFRA3O60609 AC092119.3-201ENST00000612618 583 ntBASIC19.69■□□□□ 0.74
GFRA3O60609 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.69■□□□□ 0.74
GFRA3O60609 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.69■□□□□ 0.74
GFRA3O60609 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.69■□□□□ 0.74
GFRA3O60609 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GFRA3O60609 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GFRA3O60609 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GFRA3O60609 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GFRA3O60609 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GFRA3O60609 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GFRA3O60609 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GFRA3O60609 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GFRA3O60609 KRT18P13-201ENST00000400056 1290 ntBASIC19.68■□□□□ 0.74
GFRA3O60609 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.68■□□□□ 0.74
GFRA3O60609 AC011506.1-201ENST00000474329 610 ntBASIC19.68■□□□□ 0.74
GFRA3O60609 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.68■□□□□ 0.74
GFRA3O60609 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.68■□□□□ 0.74
GFRA3O60609 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.68■□□□□ 0.74
GFRA3O60609 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.68■□□□□ 0.74
GFRA3O60609 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GFRA3O60609 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GFRA3O60609 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.67■□□□□ 0.74
GFRA3O60609 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
GFRA3O60609 AC092053.2-201ENST00000640557 1818 ntBASIC19.67■□□□□ 0.74
GFRA3O60609 ABCB10P4-201ENST00000566803 2184 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms