Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXD2O60548 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXD2O60548 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
FOXD2O60548 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXD2O60548 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXD2O60548 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXD2O60548 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXD2O60548 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXD2O60548 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXD2O60548 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
FOXD2O60548 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXD2O60548 AL390719.1-204ENST00000412397 1219 ntBASIC20.23■□□□□ 0.83
FOXD2O60548 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.23■□□□□ 0.83
FOXD2O60548 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.23■□□□□ 0.83
FOXD2O60548 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXD2O60548 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXD2O60548 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.23■□□□□ 0.83
FOXD2O60548 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXD2O60548 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXD2O60548 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXD2O60548 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXD2O60548 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.23■□□□□ 0.83
FOXD2O60548 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXD2O60548 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXD2O60548 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXD2O60548 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.23■□□□□ 0.83
FOXD2O60548 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
FOXD2O60548 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXD2O60548 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXD2O60548 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXD2O60548 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXD2O60548 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXD2O60548 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXD2O60548 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
FOXD2O60548 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXD2O60548 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXD2O60548 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
FOXD2O60548 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXD2O60548 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXD2O60548 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXD2O60548 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
FOXD2O60548 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.22■□□□□ 0.83
FOXD2O60548 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.22■□□□□ 0.83
FOXD2O60548 AC005829.2-201ENST00000571422 1056 ntBASIC20.22■□□□□ 0.83
FOXD2O60548 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.22■□□□□ 0.83
FOXD2O60548 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
FOXD2O60548 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
FOXD2O60548 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXD2O60548 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXD2O60548 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXD2O60548 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXD2O60548 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXD2O60548 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXD2O60548 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXD2O60548 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXD2O60548 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXD2O60548 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXD2O60548 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXD2O60548 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXD2O60548 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.21■□□□□ 0.83
FOXD2O60548 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXD2O60548 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXD2O60548 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
FOXD2O60548 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.21■□□□□ 0.83
FOXD2O60548 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.21■□□□□ 0.83
FOXD2O60548 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.21■□□□□ 0.83
FOXD2O60548 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.21■□□□□ 0.83
FOXD2O60548 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXD2O60548 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.21■□□□□ 0.83
FOXD2O60548 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXD2O60548 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXD2O60548 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXD2O60548 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXD2O60548 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXD2O60548 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXD2O60548 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.2■□□□□ 0.82
FOXD2O60548 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.2■□□□□ 0.82
FOXD2O60548 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXD2O60548 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
FOXD2O60548 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXD2O60548 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXD2O60548 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXD2O60548 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXD2O60548 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXD2O60548 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXD2O60548 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXD2O60548 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXD2O60548 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.2■□□□□ 0.82
FOXD2O60548 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.2■□□□□ 0.82
FOXD2O60548 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
FOXD2O60548 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXD2O60548 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXD2O60548 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXD2O60548 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXD2O60548 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXD2O60548 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXD2O60548 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXD2O60548 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXD2O60548 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
FOXD2O60548 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms