Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.75■□□□□ 0.43
GMDSO60547 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
GMDSO60547 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.75■□□□□ 0.43
GMDSO60547 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.75■□□□□ 0.43
GMDSO60547 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
GMDSO60547 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GMDSO60547 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.74■□□□□ 0.43
GMDSO60547 AL158211.5-201ENST00000623583 2518 ntBASIC17.74■□□□□ 0.43
GMDSO60547 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
GMDSO60547 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GMDSO60547 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GMDSO60547 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GMDSO60547 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GMDSO60547 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.74■□□□□ 0.43
GMDSO60547 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GMDSO60547 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GMDSO60547 FP700111.2-201ENST00000619190 1892 ntBASIC17.74■□□□□ 0.43
GMDSO60547 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.74■□□□□ 0.43
GMDSO60547 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GMDSO60547 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.74■□□□□ 0.43
GMDSO60547 AC137761.2-201ENST00000561729 223 ntBASIC17.74■□□□□ 0.43
GMDSO60547 AC145350.3-201ENST00000569033 163 ntBASIC17.74■□□□□ 0.43
GMDSO60547 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.74■□□□□ 0.43
GMDSO60547 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GMDSO60547 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GMDSO60547 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.74■□□□□ 0.43
GMDSO60547 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
GMDSO60547 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
GMDSO60547 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.74■□□□□ 0.43
GMDSO60547 AC116562.4-201ENST00000641316 2276 ntBASIC17.74■□□□□ 0.43
GMDSO60547 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GMDSO60547 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GMDSO60547 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GMDSO60547 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GMDSO60547 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
GMDSO60547 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.73■□□□□ 0.43
GMDSO60547 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GMDSO60547 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
GMDSO60547 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
GMDSO60547 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.73■□□□□ 0.43
GMDSO60547 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
GMDSO60547 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GMDSO60547 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GMDSO60547 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GMDSO60547 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GMDSO60547 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GMDSO60547 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GMDSO60547 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.73■□□□□ 0.43
GMDSO60547 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
GMDSO60547 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.73■□□□□ 0.43
GMDSO60547 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
GMDSO60547 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
GMDSO60547 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.73■□□□□ 0.43
GMDSO60547 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.73■□□□□ 0.43
GMDSO60547 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GMDSO60547 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GMDSO60547 LETM1P2-201ENST00000597330 2178 ntBASIC17.73■□□□□ 0.43
GMDSO60547 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GMDSO60547 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GMDSO60547 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GMDSO60547 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GMDSO60547 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GMDSO60547 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GMDSO60547 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GMDSO60547 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
GMDSO60547 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.72■□□□□ 0.43
GMDSO60547 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
GMDSO60547 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.72■□□□□ 0.43
GMDSO60547 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
GMDSO60547 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.72■□□□□ 0.43
GMDSO60547 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GMDSO60547 BX323043.1-201ENST00000641006 1765 ntBASIC17.72■□□□□ 0.43
GMDSO60547 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
GMDSO60547 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GMDSO60547 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GMDSO60547 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.72■□□□□ 0.43
GMDSO60547 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.72■□□□□ 0.43
GMDSO60547 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.72■□□□□ 0.43
GMDSO60547 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.72■□□□□ 0.43
GMDSO60547 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.72■□□□□ 0.43
GMDSO60547 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.72■□□□□ 0.43
GMDSO60547 UBE2DNL-204ENST00000602536 740 ntBASIC17.72■□□□□ 0.43
GMDSO60547 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
GMDSO60547 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
GMDSO60547 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
GMDSO60547 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.72■□□□□ 0.43
GMDSO60547 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
GMDSO60547 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
GMDSO60547 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.71■□□□□ 0.43
GMDSO60547 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GMDSO60547 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
GMDSO60547 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.71■□□□□ 0.43
GMDSO60547 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
GMDSO60547 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
GMDSO60547 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GMDSO60547 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
GMDSO60547 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GMDSO60547 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.71■□□□□ 0.43
GMDSO60547 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GMDSO60547 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms