Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNX3O60493 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX3O60493 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX3O60493 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX3O60493 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNX3O60493 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.82■□□□□ 0.76
SNX3O60493 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX3O60493 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNX3O60493 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX3O60493 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SNX3O60493 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX3O60493 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX3O60493 AC120498.9-201ENST00000339021 3867 ntBASIC19.81■□□□□ 0.76
SNX3O60493 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX3O60493 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX3O60493 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.81■□□□□ 0.76
SNX3O60493 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX3O60493 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SNX3O60493 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX3O60493 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.81■□□□□ 0.76
SNX3O60493 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX3O60493 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX3O60493 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX3O60493 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNX3O60493 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.81■□□□□ 0.76
SNX3O60493 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.81■□□□□ 0.76
SNX3O60493 AL138724.1-201ENST00000606771 1088 ntBASIC19.81■□□□□ 0.76
SNX3O60493 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.81■□□□□ 0.76
SNX3O60493 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SNX3O60493 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX3O60493 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.81■□□□□ 0.76
SNX3O60493 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SNX3O60493 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.81■□□□□ 0.76
SNX3O60493 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SNX3O60493 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX3O60493 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SNX3O60493 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX3O60493 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SNX3O60493 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX3O60493 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX3O60493 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNX3O60493 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX3O60493 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.8■□□□□ 0.76
SNX3O60493 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SNX3O60493 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SNX3O60493 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SNX3O60493 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX3O60493 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNX3O60493 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNX3O60493 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNX3O60493 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.8■□□□□ 0.76
SNX3O60493 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.8■□□□□ 0.76
SNX3O60493 AC136469.2-201ENST00000623944 1028 ntBASIC19.8■□□□□ 0.76
SNX3O60493 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.8■□□□□ 0.76
SNX3O60493 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNX3O60493 AC005224.4-201ENST00000583262 1652 ntBASIC19.8■□□□□ 0.76
SNX3O60493 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX3O60493 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SNX3O60493 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX3O60493 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SNX3O60493 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX3O60493 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.79■□□□□ 0.76
SNX3O60493 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNX3O60493 CROCCP3-202ENST00000420820 1947 ntBASIC19.79■□□□□ 0.76
SNX3O60493 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.79■□□□□ 0.76
SNX3O60493 UNC93B8-201ENST00000511903 705 ntBASIC19.79■□□□□ 0.76
SNX3O60493 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.79■□□□□ 0.76
SNX3O60493 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.79■□□□□ 0.76
SNX3O60493 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX3O60493 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX3O60493 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.79■□□□□ 0.76
SNX3O60493 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.79■□□□□ 0.76
SNX3O60493 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.79■□□□□ 0.76
SNX3O60493 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX3O60493 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.79■□□□□ 0.76
SNX3O60493 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.79■□□□□ 0.76
SNX3O60493 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX3O60493 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX3O60493 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX3O60493 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.78■□□□□ 0.76
SNX3O60493 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.78■□□□□ 0.76
SNX3O60493 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX3O60493 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNX3O60493 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX3O60493 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX3O60493 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX3O60493 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNX3O60493 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX3O60493 SERBP1P1-201ENST00000396021 1160 ntBASIC19.78■□□□□ 0.76
SNX3O60493 SRD5A1P1-201ENST00000442297 786 ntBASIC19.78■□□□□ 0.76
SNX3O60493 EEF1DP3-203ENST00000566025 782 ntBASIC19.78■□□□□ 0.76
SNX3O60493 AC133561.4-201ENST00000566112 224 ntBASIC19.78■□□□□ 0.76
SNX3O60493 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNX3O60493 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.78■□□□□ 0.76
SNX3O60493 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
SNX3O60493 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SNX3O60493 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SNX3O60493 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SNX3O60493 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX3O60493 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms