Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
URB1O60287 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
URB1O60287 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.02■□□□□ 0.63
URB1O60287 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.02■□□□□ 0.63
URB1O60287 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.02■□□□□ 0.63
URB1O60287 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.02■□□□□ 0.63
URB1O60287 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
URB1O60287 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
URB1O60287 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
URB1O60287 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
URB1O60287 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.01■□□□□ 0.63
URB1O60287 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
URB1O60287 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.01■□□□□ 0.63
URB1O60287 AL356652.1-201ENST00000615962 565 ntBASIC19.01■□□□□ 0.63
URB1O60287 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.01■□□□□ 0.63
URB1O60287 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
URB1O60287 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
URB1O60287 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
URB1O60287 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
URB1O60287 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
URB1O60287 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
URB1O60287 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
URB1O60287 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
URB1O60287 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
URB1O60287 AC080038.3-201ENST00000623346 1952 ntBASIC19.01■□□□□ 0.63
URB1O60287 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.01■□□□□ 0.63
URB1O60287 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
URB1O60287 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
URB1O60287 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
URB1O60287 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.01■□□□□ 0.63
URB1O60287 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
URB1O60287 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
URB1O60287 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19■□□□□ 0.63
URB1O60287 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
URB1O60287 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
URB1O60287 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19■□□□□ 0.63
URB1O60287 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
URB1O60287 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19■□□□□ 0.63
URB1O60287 CRYGFP-201ENST00000418459 633 ntBASIC19■□□□□ 0.63
URB1O60287 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19■□□□□ 0.63
URB1O60287 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19■□□□□ 0.63
URB1O60287 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19■□□□□ 0.63
URB1O60287 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19■□□□□ 0.63
URB1O60287 AC068473.5-201ENST00000616428 2072 ntBASIC19■□□□□ 0.63
URB1O60287 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19■□□□□ 0.63
URB1O60287 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
URB1O60287 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19■□□□□ 0.63
URB1O60287 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
URB1O60287 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19■□□□□ 0.63
URB1O60287 LIN28AP1-201ENST00000429574 405 ntBASIC19■□□□□ 0.63
URB1O60287 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19■□□□□ 0.63
URB1O60287 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
URB1O60287 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
URB1O60287 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19■□□□□ 0.63
URB1O60287 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19■□□□□ 0.63
URB1O60287 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19■□□□□ 0.63
URB1O60287 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19■□□□□ 0.63
URB1O60287 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
URB1O60287 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
URB1O60287 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
URB1O60287 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.99■□□□□ 0.63
URB1O60287 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.99■□□□□ 0.63
URB1O60287 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.99■□□□□ 0.63
URB1O60287 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
URB1O60287 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.99■□□□□ 0.63
URB1O60287 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
URB1O60287 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
URB1O60287 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
URB1O60287 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
URB1O60287 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.99■□□□□ 0.63
URB1O60287 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
URB1O60287 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
URB1O60287 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.99■□□□□ 0.63
URB1O60287 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
URB1O60287 KRT18P48-201ENST00000434763 852 ntBASIC18.99■□□□□ 0.63
URB1O60287 AP002982.1-201ENST00000492365 877 ntBASIC18.99■□□□□ 0.63
URB1O60287 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.99■□□□□ 0.63
URB1O60287 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
URB1O60287 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
URB1O60287 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
URB1O60287 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
URB1O60287 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
URB1O60287 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
URB1O60287 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
URB1O60287 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.98■□□□□ 0.63
URB1O60287 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.98■□□□□ 0.63
URB1O60287 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
URB1O60287 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
URB1O60287 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.98■□□□□ 0.63
URB1O60287 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.98■□□□□ 0.63
URB1O60287 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.98■□□□□ 0.63
URB1O60287 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
URB1O60287 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
URB1O60287 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
URB1O60287 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
URB1O60287 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
URB1O60287 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
URB1O60287 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
URB1O60287 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.98■□□□□ 0.63
URB1O60287 PGM5P4-201ENST00000421970 445 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms