Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 C2orf69P4-201ENST00000565394 541 ntBASIC17.95■□□□□ 0.46
TRAF3IP2O43734 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.95■□□□□ 0.46
TRAF3IP2O43734 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP2O43734 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 AL391422.3-201ENST00000603791 2761 ntBASIC17.93■□□□□ 0.46
TRAF3IP2O43734 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 SLC29A4P1-201ENST00000398760 971 ntBASIC17.93■□□□□ 0.46
TRAF3IP2O43734 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.93■□□□□ 0.46
TRAF3IP2O43734 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF3IP2O43734 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 AC092118.2-201ENST00000613495 667 ntBASIC17.92■□□□□ 0.46
TRAF3IP2O43734 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAF3IP2O43734 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAF3IP2O43734 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAF3IP2O43734 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAF3IP2O43734 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.91■□□□□ 0.46
TRAF3IP2O43734 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAF3IP2O43734 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAF3IP2O43734 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRAF3IP2O43734 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAF3IP2O43734 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAF3IP2O43734 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAF3IP2O43734 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms