Protein–RNA interactions for Protein: O43464

HTRA2, Serine protease HTRA2, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2O43464 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HTRA2O43464 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HTRA2O43464 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
HTRA2O43464 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
HTRA2O43464 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.32■□□□□ 0.84
HTRA2O43464 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
HTRA2O43464 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.32■□□□□ 0.84
HTRA2O43464 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA2O43464 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA2O43464 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.31■□□□□ 0.84
HTRA2O43464 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA2O43464 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA2O43464 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.31■□□□□ 0.84
HTRA2O43464 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.31■□□□□ 0.84
HTRA2O43464 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
HTRA2O43464 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA2O43464 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA2O43464 CD99P1-205ENST00000527459 561 ntBASIC20.31■□□□□ 0.84
HTRA2O43464 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA2O43464 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.31■□□□□ 0.84
HTRA2O43464 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA2O43464 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTRA2O43464 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HTRA2O43464 RNF165-205ENST00000588679 2904 ntBASIC20.3■□□□□ 0.84
HTRA2O43464 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA2O43464 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.3■□□□□ 0.84
HTRA2O43464 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA2O43464 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.3■□□□□ 0.84
HTRA2O43464 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA2O43464 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HTRA2O43464 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.3■□□□□ 0.84
HTRA2O43464 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.3■□□□□ 0.84
HTRA2O43464 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.3■□□□□ 0.84
HTRA2O43464 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.3■□□□□ 0.84
HTRA2O43464 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
HTRA2O43464 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HTRA2O43464 AC073314.1-201ENST00000568729 2216 ntBASIC20.3■□□□□ 0.84
HTRA2O43464 FEM1AP1-201ENST00000431297 1995 ntBASIC20.3■□□□□ 0.84
HTRA2O43464 AP005212.1-201ENST00000581547 1997 ntBASIC20.3■□□□□ 0.84
HTRA2O43464 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.3■□□□□ 0.84
HTRA2O43464 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
HTRA2O43464 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA2O43464 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTRA2O43464 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HTRA2O43464 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA2O43464 AC020907.5-201ENST00000624372 1936 ntBASIC20.29■□□□□ 0.84
HTRA2O43464 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA2O43464 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA2O43464 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
HTRA2O43464 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA2O43464 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA2O43464 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA2O43464 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA2O43464 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA2O43464 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.29■□□□□ 0.84
HTRA2O43464 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.29■□□□□ 0.84
HTRA2O43464 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA2O43464 RNA5SP413-201ENST00000516373 109 ntBASIC20.29■□□□□ 0.84
HTRA2O43464 AC023632.3-201ENST00000521633 145 ntBASIC20.29■□□□□ 0.84
HTRA2O43464 PNMA6B-201ENST00000538162 1200 ntBASIC20.29■□□□□ 0.84
HTRA2O43464 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA2O43464 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA2O43464 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA2O43464 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.29■□□□□ 0.84
HTRA2O43464 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.29■□□□□ 0.84
HTRA2O43464 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HTRA2O43464 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.29■□□□□ 0.84
HTRA2O43464 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.29■□□□□ 0.84
HTRA2O43464 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.28■□□□□ 0.84
HTRA2O43464 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.28■□□□□ 0.84
HTRA2O43464 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA2O43464 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA2O43464 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
HTRA2O43464 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA2O43464 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.28■□□□□ 0.84
HTRA2O43464 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA2O43464 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA2O43464 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA2O43464 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA2O43464 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA2O43464 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA2O43464 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.28■□□□□ 0.84
HTRA2O43464 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA2O43464 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.28■□□□□ 0.84
HTRA2O43464 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HTRA2O43464 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.28■□□□□ 0.84
HTRA2O43464 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.28■□□□□ 0.84
HTRA2O43464 AC092368.3-202ENST00000574180 1591 ntBASIC20.28■□□□□ 0.84
HTRA2O43464 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HTRA2O43464 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.28■□□□□ 0.84
HTRA2O43464 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
HTRA2O43464 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.28■□□□□ 0.84
HTRA2O43464 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA2O43464 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.27■□□□□ 0.84
HTRA2O43464 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTRA2O43464 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.27■□□□□ 0.84
HTRA2O43464 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.27■□□□□ 0.84
HTRA2O43464 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.27■□□□□ 0.84
HTRA2O43464 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
HTRA2O43464 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms