Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 FAM8A6P-201ENST00000407496 1135 ntBASIC28.26■■■□□ 2.11
CHD2O14647 B3GAT3P1-201ENST00000471720 806 ntBASIC28.26■■■□□ 2.11
CHD2O14647 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHD2O14647 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHD2O14647 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CHD2O14647 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC28.26■■■□□ 2.11
CHD2O14647 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CHD2O14647 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHD2O14647 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHD2O14647 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHD2O14647 AC117947.1-201ENST00000427448 529 ntBASIC28.25■■■□□ 2.11
CHD2O14647 DUSP5P1-201ENST00000441325 1139 ntBASIC28.25■■■□□ 2.11
CHD2O14647 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHD2O14647 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC28.25■■■□□ 2.11
CHD2O14647 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CHD2O14647 FSCN1P1-201ENST00000568912 1481 ntBASIC28.25■■■□□ 2.11
CHD2O14647 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
CHD2O14647 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC28.25■■■□□ 2.11
CHD2O14647 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC28.25■■■□□ 2.11
CHD2O14647 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC28.25■■■□□ 2.11
CHD2O14647 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHD2O14647 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CHD2O14647 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
CHD2O14647 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
CHD2O14647 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
CHD2O14647 AL031133.1-201ENST00000406807 723 ntBASIC28.24■■■□□ 2.11
CHD2O14647 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC28.24■■■□□ 2.11
CHD2O14647 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CHD2O14647 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
CHD2O14647 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CHD2O14647 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CHD2O14647 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CHD2O14647 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
CHD2O14647 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CHD2O14647 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CHD2O14647 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
CHD2O14647 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
CHD2O14647 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC28.23■■■□□ 2.11
CHD2O14647 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC28.23■■■□□ 2.11
CHD2O14647 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC28.23■■■□□ 2.11
CHD2O14647 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
CHD2O14647 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC28.23■■■□□ 2.11
CHD2O14647 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CHD2O14647 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CHD2O14647 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC28.22■■■□□ 2.11
CHD2O14647 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CHD2O14647 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHD2O14647 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHD2O14647 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC28.22■■■□□ 2.11
CHD2O14647 GOLGA2P6-201ENST00000340929 2049 ntBASIC28.22■■■□□ 2.11
CHD2O14647 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
CHD2O14647 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHD2O14647 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC28.22■■■□□ 2.11
CHD2O14647 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC28.22■■■□□ 2.11
CHD2O14647 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHD2O14647 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC28.22■■■□□ 2.11
CHD2O14647 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHD2O14647 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHD2O14647 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
CHD2O14647 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHD2O14647 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHD2O14647 COPS8-203ENST00000409334 794 ntTSL 5 BASIC28.21■■■□□ 2.11
CHD2O14647 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC28.21■■■□□ 2.11
CHD2O14647 AC128688.1-201ENST00000487626 519 ntBASIC28.21■■■□□ 2.11
CHD2O14647 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC28.21■■■□□ 2.11
CHD2O14647 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHD2O14647 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC28.21■■■□□ 2.11
CHD2O14647 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHD2O14647 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHD2O14647 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC28.2■■■□□ 2.11
CHD2O14647 INGX-201ENST00000359239 846 ntBASIC28.2■■■□□ 2.11
CHD2O14647 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC28.2■■■□□ 2.11
CHD2O14647 LINC01238-205ENST00000567549 1107 ntBASIC28.2■■■□□ 2.11
CHD2O14647 AC091076.1-201ENST00000610741 619 ntBASIC28.2■■■□□ 2.11
CHD2O14647 AL445675.2-201ENST00000620291 557 ntBASIC28.2■■■□□ 2.11
CHD2O14647 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CHD2O14647 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CHD2O14647 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CHD2O14647 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
CHD2O14647 ATP5G1P1-201ENST00000448724 379 ntBASIC28.2■■■□□ 2.1
CHD2O14647 EGLN1P1-201ENST00000531623 762 ntBASIC28.2■■■□□ 2.1
CHD2O14647 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.1
CHD2O14647 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC28.2■■■□□ 2.1
CHD2O14647 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC28.19■■■□□ 2.1
CHD2O14647 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC28.19■■■□□ 2.1
CHD2O14647 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC28.19■■■□□ 2.1
CHD2O14647 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC28.19■■■□□ 2.1
CHD2O14647 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC28.19■■■□□ 2.1
CHD2O14647 ME2-206ENST00000638410 2289 ntTSL 5 BASIC28.19■■■□□ 2.1
CHD2O14647 ME2-210ENST00000639255 2262 ntTSL 5 BASIC28.19■■■□□ 2.1
CHD2O14647 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CHD2O14647 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CHD2O14647 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC28.19■■■□□ 2.1
CHD2O14647 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC28.19■■■□□ 2.1
CHD2O14647 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CHD2O14647 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC28.19■■■□□ 2.1
CHD2O14647 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC28.18■■■□□ 2.1
CHD2O14647 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC28.18■■■□□ 2.1
CHD2O14647 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
CHD2O14647 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms