Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC34.76■■■■□ 3.15
CUX2O14529 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC34.75■■■■□ 3.15
CUX2O14529 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC34.75■■■■□ 3.15
CUX2O14529 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC34.75■■■■□ 3.15
CUX2O14529 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC34.75■■■■□ 3.15
CUX2O14529 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC34.75■■■■□ 3.15
CUX2O14529 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC34.75■■■■□ 3.15
CUX2O14529 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CUX2O14529 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
CUX2O14529 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC34.75■■■■□ 3.15
CUX2O14529 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC34.74■■■■□ 3.15
CUX2O14529 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC34.74■■■■□ 3.15
CUX2O14529 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC34.74■■■■□ 3.15
CUX2O14529 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC34.74■■■■□ 3.15
CUX2O14529 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC34.74■■■■□ 3.15
CUX2O14529 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC34.74■■■■□ 3.15
CUX2O14529 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC34.74■■■■□ 3.15
CUX2O14529 PTK2-216ENST00000519881 863 ntTSL 3 BASIC34.74■■■■□ 3.15
CUX2O14529 SDHD-206ENST00000528182 754 ntTSL 3 BASIC34.74■■■■□ 3.15
CUX2O14529 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC34.74■■■■□ 3.15
CUX2O14529 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC34.74■■■■□ 3.15
CUX2O14529 AC130371.2-201ENST00000619443 611 ntBASIC34.74■■■■□ 3.15
CUX2O14529 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
CUX2O14529 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
CUX2O14529 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC34.73■■■■□ 3.15
CUX2O14529 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC34.73■■■■□ 3.15
CUX2O14529 HOMER2P1-201ENST00000455653 964 ntBASIC34.73■■■■□ 3.15
CUX2O14529 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC34.73■■■■□ 3.15
CUX2O14529 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC34.73■■■■□ 3.15
CUX2O14529 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC34.73■■■■□ 3.15
CUX2O14529 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC34.72■■■■□ 3.15
CUX2O14529 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC34.72■■■■□ 3.15
CUX2O14529 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC34.72■■■■□ 3.15
CUX2O14529 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC34.72■■■■□ 3.15
CUX2O14529 FSCN1P1-201ENST00000568912 1481 ntBASIC34.72■■■■□ 3.15
CUX2O14529 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CUX2O14529 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
CUX2O14529 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC34.71■■■■□ 3.15
CUX2O14529 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
CUX2O14529 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC34.71■■■■□ 3.15
CUX2O14529 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CUX2O14529 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CUX2O14529 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC34.71■■■■□ 3.15
CUX2O14529 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
CUX2O14529 AC092053.2-201ENST00000640557 1818 ntBASIC34.71■■■■□ 3.15
CUX2O14529 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CUX2O14529 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
CUX2O14529 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC34.71■■■■□ 3.15
CUX2O14529 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC34.71■■■■□ 3.15
CUX2O14529 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC34.7■■■■□ 3.15
CUX2O14529 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC34.7■■■■□ 3.15
CUX2O14529 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC34.7■■■■□ 3.15
CUX2O14529 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
CUX2O14529 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC34.7■■■■□ 3.15
CUX2O14529 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
CUX2O14529 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC34.7■■■■□ 3.15
CUX2O14529 PRR29-207ENST00000580752 458 ntTSL 3 BASIC34.7■■■■□ 3.15
CUX2O14529 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC34.7■■■■□ 3.14
CUX2O14529 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC34.69■■■■□ 3.14
CUX2O14529 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
CUX2O14529 ANKRD20A18P-201ENST00000359341 492 ntBASIC34.69■■■■□ 3.14
CUX2O14529 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
CUX2O14529 PKM-204ENST00000449901 2526 ntTSL 2 BASIC34.69■■■■□ 3.14
CUX2O14529 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC34.69■■■■□ 3.14
CUX2O14529 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC34.69■■■■□ 3.14
CUX2O14529 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
CUX2O14529 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
CUX2O14529 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
CUX2O14529 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC34.68■■■■□ 3.14
CUX2O14529 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
CUX2O14529 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
CUX2O14529 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
CUX2O14529 AC068473.5-201ENST00000616428 2072 ntBASIC34.68■■■■□ 3.14
CUX2O14529 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
CUX2O14529 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
CUX2O14529 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC34.68■■■■□ 3.14
CUX2O14529 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
CUX2O14529 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
CUX2O14529 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC34.67■■■■□ 3.14
CUX2O14529 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC34.67■■■■□ 3.14
CUX2O14529 AL031985.4-201ENST00000642138 673 ntBASIC34.67■■■■□ 3.14
CUX2O14529 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC34.67■■■■□ 3.14
CUX2O14529 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
CUX2O14529 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
CUX2O14529 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
CUX2O14529 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CUX2O14529 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
CUX2O14529 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC34.66■■■■□ 3.14
CUX2O14529 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CUX2O14529 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC34.66■■■■□ 3.14
CUX2O14529 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC34.66■■■■□ 3.14
CUX2O14529 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC34.66■■■■□ 3.14
CUX2O14529 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC34.66■■■■□ 3.14
CUX2O14529 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CUX2O14529 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
CUX2O14529 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
CUX2O14529 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
CUX2O14529 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC34.65■■■■□ 3.14
CUX2O14529 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
CUX2O14529 AL359075.1-203ENST00000462729 1002 ntBASIC34.65■■■■□ 3.14
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms