Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.7■□□□□ 0.74
EIF3FO00303 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
EIF3FO00303 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
EIF3FO00303 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3FO00303 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.7■□□□□ 0.74
EIF3FO00303 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.7■□□□□ 0.74
EIF3FO00303 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.7■□□□□ 0.74
EIF3FO00303 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.7■□□□□ 0.74
EIF3FO00303 AC023632.3-201ENST00000521633 145 ntBASIC19.7■□□□□ 0.74
EIF3FO00303 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.7■□□□□ 0.74
EIF3FO00303 AL031963.3-201ENST00000606441 850 ntBASIC19.7■□□□□ 0.74
EIF3FO00303 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.7■□□□□ 0.74
EIF3FO00303 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3FO00303 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.7■□□□□ 0.74
EIF3FO00303 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3FO00303 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3FO00303 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3FO00303 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3FO00303 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3FO00303 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3FO00303 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3FO00303 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3FO00303 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3FO00303 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3FO00303 KRT8P17-201ENST00000453110 1448 ntBASIC19.69■□□□□ 0.74
EIF3FO00303 AL158211.5-201ENST00000623583 2518 ntBASIC19.69■□□□□ 0.74
EIF3FO00303 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.69■□□□□ 0.74
EIF3FO00303 NCF1B-203ENST00000435988 1254 ntBASIC19.69■□□□□ 0.74
EIF3FO00303 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.69■□□□□ 0.74
EIF3FO00303 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.69■□□□□ 0.74
EIF3FO00303 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.69■□□□□ 0.74
EIF3FO00303 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.69■□□□□ 0.74
EIF3FO00303 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.69■□□□□ 0.74
EIF3FO00303 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.69■□□□□ 0.74
EIF3FO00303 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EIF3FO00303 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
EIF3FO00303 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3FO00303 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3FO00303 KRT8P20-201ENST00000423953 1409 ntBASIC19.68■□□□□ 0.74
EIF3FO00303 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
EIF3FO00303 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3FO00303 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3FO00303 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
EIF3FO00303 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
EIF3FO00303 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3FO00303 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
EIF3FO00303 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3FO00303 AC083906.2-201ENST00000511578 360 ntBASIC19.68■□□□□ 0.74
EIF3FO00303 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.68■□□□□ 0.74
EIF3FO00303 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.68■□□□□ 0.74
EIF3FO00303 AC092666.2-201ENST00000613287 246 ntBASIC19.68■□□□□ 0.74
EIF3FO00303 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
EIF3FO00303 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3FO00303 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3FO00303 TCF3P1-201ENST00000423021 1937 ntBASIC19.68■□□□□ 0.74
EIF3FO00303 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3FO00303 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.68■□□□□ 0.74
EIF3FO00303 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3FO00303 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EIF3FO00303 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.67■□□□□ 0.74
EIF3FO00303 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.67■□□□□ 0.74
EIF3FO00303 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3FO00303 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3FO00303 HLA-G-202ENST00000376815 851 ntBASIC19.67■□□□□ 0.74
EIF3FO00303 HLA-G-203ENST00000376818 1127 ntBASIC19.67■□□□□ 0.74
EIF3FO00303 BX276092.2-201ENST00000417668 665 ntBASIC19.67■□□□□ 0.74
EIF3FO00303 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.67■□□□□ 0.74
EIF3FO00303 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
EIF3FO00303 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.67■□□□□ 0.74
EIF3FO00303 AC092118.2-201ENST00000613495 667 ntBASIC19.67■□□□□ 0.74
EIF3FO00303 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3FO00303 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3FO00303 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.67■□□□□ 0.74
EIF3FO00303 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3FO00303 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
EIF3FO00303 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3FO00303 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
EIF3FO00303 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3FO00303 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3FO00303 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.66■□□□□ 0.74
EIF3FO00303 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
EIF3FO00303 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3FO00303 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3FO00303 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
EIF3FO00303 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
EIF3FO00303 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
EIF3FO00303 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.66■□□□□ 0.74
EIF3FO00303 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
EIF3FO00303 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
EIF3FO00303 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3FO00303 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3FO00303 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
EIF3FO00303 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3FO00303 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3FO00303 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3FO00303 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3FO00303 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3FO00303 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3FO00303 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
EIF3FO00303 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms