Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF11BO00300 MIR6084-201ENST00000622012 110 ntBASIC18.58■□□□□ 0.56
TNFRSF11BO00300 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.58■□□□□ 0.56
TNFRSF11BO00300 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF11BO00300 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF11BO00300 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF11BO00300 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF11BO00300 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TNFRSF11BO00300 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.58■□□□□ 0.56
TNFRSF11BO00300 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
TNFRSF11BO00300 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF11BO00300 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 AP000974.1-201ENST00000623909 2387 ntBASIC18.57■□□□□ 0.56
TNFRSF11BO00300 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 DUX4L2-201ENST00000561772 1275 ntBASIC18.57■□□□□ 0.56
TNFRSF11BO00300 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 DUX4L6-201ENST00000626483 1275 ntBASIC18.57■□□□□ 0.56
TNFRSF11BO00300 DUX4L1-201ENST00000627662 1275 ntBASIC18.57■□□□□ 0.56
TNFRSF11BO00300 DUX4L8-201ENST00000629013 1275 ntBASIC18.57■□□□□ 0.56
TNFRSF11BO00300 DUX4L3-201ENST00000630187 1275 ntBASIC18.57■□□□□ 0.56
TNFRSF11BO00300 DUX4L7-201ENST00000630678 1275 ntBASIC18.57■□□□□ 0.56
TNFRSF11BO00300 DUX4L5-201ENST00000630834 1275 ntBASIC18.57■□□□□ 0.56
TNFRSF11BO00300 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 AC005332.7-201ENST00000614046 2005 ntBASIC18.57■□□□□ 0.56
TNFRSF11BO00300 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNFRSF11BO00300 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNFRSF11BO00300 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 AC007322.3-201ENST00000426526 701 ntBASIC18.55■□□□□ 0.56
TNFRSF11BO00300 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 AL031432.3-201ENST00000607698 485 ntBASIC18.55■□□□□ 0.56
TNFRSF11BO00300 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.55■□□□□ 0.56
TNFRSF11BO00300 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF11BO00300 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNFRSF11BO00300 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms