Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
H3BM21 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H3BM21 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.03■□□□□ 0.8
H3BM21 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
H3BM21 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H3BM21 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H3BM21 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.03■□□□□ 0.8
H3BM21 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
H3BM21 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
H3BM21 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
H3BM21 AC008550.1-201ENST00000511500 884 ntBASIC20.03■□□□□ 0.8
H3BM21 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.03■□□□□ 0.8
H3BM21 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.03■□□□□ 0.8
H3BM21 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.03■□□□□ 0.8
H3BM21 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
H3BM21 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.03■□□□□ 0.8
H3BM21 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
H3BM21 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.03■□□□□ 0.8
H3BM21 FP700111.2-201ENST00000619190 1892 ntBASIC20.03■□□□□ 0.8
H3BM21 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
H3BM21 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.02■□□□□ 0.8
H3BM21 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
H3BM21 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
H3BM21 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
H3BM21 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
H3BM21 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.02■□□□□ 0.8
H3BM21 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
H3BM21 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
H3BM21 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
H3BM21 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
H3BM21 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
H3BM21 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
H3BM21 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
H3BM21 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.02■□□□□ 0.8
H3BM21 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
H3BM21 RN7SL471P-201ENST00000580476 299 ntBASIC20.02■□□□□ 0.8
H3BM21 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.02■□□□□ 0.8
H3BM21 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
H3BM21 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.02■□□□□ 0.8
H3BM21 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
H3BM21 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.02■□□□□ 0.8
H3BM21 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
H3BM21 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
H3BM21 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
H3BM21 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
H3BM21 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
H3BM21 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
H3BM21 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
H3BM21 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.02■□□□□ 0.79
H3BM21 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
H3BM21 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.01■□□□□ 0.79
H3BM21 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
H3BM21 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.01■□□□□ 0.79
H3BM21 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.01■□□□□ 0.79
H3BM21 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.01■□□□□ 0.79
H3BM21 AL390719.1-204ENST00000412397 1219 ntBASIC20.01■□□□□ 0.79
H3BM21 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.01■□□□□ 0.79
H3BM21 MIR2861-201ENST00000636310 90 ntBASIC20.01■□□□□ 0.79
H3BM21 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
H3BM21 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
H3BM21 AC007225.1-201ENST00000566331 1836 ntBASIC20.01■□□□□ 0.79
H3BM21 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
H3BM21 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
H3BM21 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
H3BM21 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
H3BM21 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
H3BM21 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.01■□□□□ 0.79
H3BM21 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20■□□□□ 0.79
H3BM21 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20■□□□□ 0.79
H3BM21 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20■□□□□ 0.79
H3BM21 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H3BM21 ABHD17AP6-201ENST00000458502 1044 ntBASIC20■□□□□ 0.79
H3BM21 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20■□□□□ 0.79
H3BM21 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20■□□□□ 0.79
H3BM21 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20■□□□□ 0.79
H3BM21 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20■□□□□ 0.79
H3BM21 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20■□□□□ 0.79
H3BM21 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H3BM21 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
H3BM21 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
H3BM21 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
H3BM21 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
H3BM21 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
H3BM21 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H3BM21 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H3BM21 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
H3BM21 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.99■□□□□ 0.79
H3BM21 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
H3BM21 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.99■□□□□ 0.79
H3BM21 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
H3BM21 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.99■□□□□ 0.79
H3BM21 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H3BM21 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
H3BM21 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
H3BM21 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
H3BM21 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H3BM21 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H3BM21 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
H3BM21 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.99■□□□□ 0.79
H3BM21 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms