Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM6-TRIM34B2RNG4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC24.63■■□□□ 1.53
TRIM6-TRIM34B2RNG4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM6-TRIM34B2RNG4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TRIM6-TRIM34B2RNG4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC24.62■■□□□ 1.53
TRIM6-TRIM34B2RNG4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC24.62■■□□□ 1.53
TRIM6-TRIM34B2RNG4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM6-TRIM34B2RNG4 AF201337.1-201ENST00000520239 748 ntBASIC24.62■■□□□ 1.53
TRIM6-TRIM34B2RNG4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC24.62■■□□□ 1.53
TRIM6-TRIM34B2RNG4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM6-TRIM34B2RNG4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM6-TRIM34B2RNG4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC24.62■■□□□ 1.53
TRIM6-TRIM34B2RNG4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRIM6-TRIM34B2RNG4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
TRIM6-TRIM34B2RNG4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM6-TRIM34B2RNG4 KRT17P1-201ENST00000399211 1546 ntBASIC24.61■■□□□ 1.53
TRIM6-TRIM34B2RNG4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.61■■□□□ 1.53
TRIM6-TRIM34B2RNG4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC24.61■■□□□ 1.53
TRIM6-TRIM34B2RNG4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM6-TRIM34B2RNG4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM6-TRIM34B2RNG4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.61■■□□□ 1.53
TRIM6-TRIM34B2RNG4 AC006970.2-201ENST00000450065 779 ntBASIC24.61■■□□□ 1.53
TRIM6-TRIM34B2RNG4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.61■■□□□ 1.53
TRIM6-TRIM34B2RNG4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.61■■□□□ 1.53
TRIM6-TRIM34B2RNG4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.61■■□□□ 1.53
TRIM6-TRIM34B2RNG4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.61■■□□□ 1.53
TRIM6-TRIM34B2RNG4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.61■■□□□ 1.53
TRIM6-TRIM34B2RNG4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
TRIM6-TRIM34B2RNG4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
TRIM6-TRIM34B2RNG4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
TRIM6-TRIM34B2RNG4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC24.61■■□□□ 1.53
TRIM6-TRIM34B2RNG4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.61■■□□□ 1.53
TRIM6-TRIM34B2RNG4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC24.6■■□□□ 1.53
TRIM6-TRIM34B2RNG4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
TRIM6-TRIM34B2RNG4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM6-TRIM34B2RNG4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM6-TRIM34B2RNG4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.6■■□□□ 1.53
TRIM6-TRIM34B2RNG4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC24.6■■□□□ 1.53
TRIM6-TRIM34B2RNG4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
TRIM6-TRIM34B2RNG4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM6-TRIM34B2RNG4 MKRN4P-201ENST00000444706 1521 ntBASIC24.6■■□□□ 1.53
TRIM6-TRIM34B2RNG4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC24.6■■□□□ 1.53
TRIM6-TRIM34B2RNG4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM6-TRIM34B2RNG4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
TRIM6-TRIM34B2RNG4 H19-201ENST00000411754 1788 ntTSL 5 BASIC24.59■■□□□ 1.53
TRIM6-TRIM34B2RNG4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC24.59■■□□□ 1.53
TRIM6-TRIM34B2RNG4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC24.59■■□□□ 1.53
TRIM6-TRIM34B2RNG4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM6-TRIM34B2RNG4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM6-TRIM34B2RNG4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM6-TRIM34B2RNG4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
TRIM6-TRIM34B2RNG4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM6-TRIM34B2RNG4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM6-TRIM34B2RNG4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM6-TRIM34B2RNG4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.59■■□□□ 1.53
TRIM6-TRIM34B2RNG4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.59■■□□□ 1.53
TRIM6-TRIM34B2RNG4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC24.59■■□□□ 1.53
TRIM6-TRIM34B2RNG4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM6-TRIM34B2RNG4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM6-TRIM34B2RNG4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM6-TRIM34B2RNG4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TRIM6-TRIM34B2RNG4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM6-TRIM34B2RNG4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM6-TRIM34B2RNG4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.58■■□□□ 1.53
TRIM6-TRIM34B2RNG4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC24.58■■□□□ 1.53
TRIM6-TRIM34B2RNG4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM6-TRIM34B2RNG4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC24.58■■□□□ 1.53
TRIM6-TRIM34B2RNG4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
TRIM6-TRIM34B2RNG4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM6-TRIM34B2RNG4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC24.58■■□□□ 1.53
TRIM6-TRIM34B2RNG4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM6-TRIM34B2RNG4 AL589743.5-201ENST00000616611 1050 ntBASIC24.58■■□□□ 1.53
TRIM6-TRIM34B2RNG4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM6-TRIM34B2RNG4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TRIM6-TRIM34B2RNG4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.58■■□□□ 1.53
TRIM6-TRIM34B2RNG4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
TRIM6-TRIM34B2RNG4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
TRIM6-TRIM34B2RNG4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC24.58■■□□□ 1.52
TRIM6-TRIM34B2RNG4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.52
TRIM6-TRIM34B2RNG4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC24.58■■□□□ 1.52
TRIM6-TRIM34B2RNG4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM6-TRIM34B2RNG4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC24.57■■□□□ 1.52
TRIM6-TRIM34B2RNG4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM6-TRIM34B2RNG4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM6-TRIM34B2RNG4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC24.57■■□□□ 1.52
TRIM6-TRIM34B2RNG4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM6-TRIM34B2RNG4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM6-TRIM34B2RNG4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.57■■□□□ 1.52
TRIM6-TRIM34B2RNG4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC24.57■■□□□ 1.52
TRIM6-TRIM34B2RNG4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM6-TRIM34B2RNG4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM6-TRIM34B2RNG4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM6-TRIM34B2RNG4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM6-TRIM34B2RNG4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC24.57■■□□□ 1.52
TRIM6-TRIM34B2RNG4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM6-TRIM34B2RNG4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
TRIM6-TRIM34B2RNG4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM6-TRIM34B2RNG4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TRIM6-TRIM34B2RNG4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC24.56■■□□□ 1.52
TRIM6-TRIM34B2RNG4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms