Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.77■□□□□ 0.44
MBD3L3A6NE82 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MBD3L3A6NE82 FP700111.2-201ENST00000619190 1892 ntBASIC17.77■□□□□ 0.43
MBD3L3A6NE82 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.77■□□□□ 0.43
MBD3L3A6NE82 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.77■□□□□ 0.43
MBD3L3A6NE82 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
MBD3L3A6NE82 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MBD3L3A6NE82 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
MBD3L3A6NE82 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.76■□□□□ 0.43
MBD3L3A6NE82 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MBD3L3A6NE82 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MBD3L3A6NE82 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.76■□□□□ 0.43
MBD3L3A6NE82 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MBD3L3A6NE82 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MBD3L3A6NE82 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
MBD3L3A6NE82 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MBD3L3A6NE82 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
MBD3L3A6NE82 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MBD3L3A6NE82 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MBD3L3A6NE82 AL049637.2-201ENST00000641778 930 ntBASIC17.76■□□□□ 0.43
MBD3L3A6NE82 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.76■□□□□ 0.43
MBD3L3A6NE82 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.76■□□□□ 0.43
MBD3L3A6NE82 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.76■□□□□ 0.43
MBD3L3A6NE82 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MBD3L3A6NE82 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD3L3A6NE82 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MBD3L3A6NE82 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD3L3A6NE82 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MBD3L3A6NE82 KRT8P17-201ENST00000453110 1448 ntBASIC17.75■□□□□ 0.43
MBD3L3A6NE82 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MBD3L3A6NE82 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.75■□□□□ 0.43
MBD3L3A6NE82 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.75■□□□□ 0.43
MBD3L3A6NE82 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.75■□□□□ 0.43
MBD3L3A6NE82 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MBD3L3A6NE82 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
MBD3L3A6NE82 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.75■□□□□ 0.43
MBD3L3A6NE82 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.75■□□□□ 0.43
MBD3L3A6NE82 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD3L3A6NE82 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MBD3L3A6NE82 NBPF21P-201ENST00000425093 1451 ntBASIC17.75■□□□□ 0.43
MBD3L3A6NE82 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 KRT16P5-201ENST00000455284 522 ntBASIC17.74■□□□□ 0.43
MBD3L3A6NE82 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MBD3L3A6NE82 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.73■□□□□ 0.43
MBD3L3A6NE82 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.73■□□□□ 0.43
MBD3L3A6NE82 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD3L3A6NE82 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
MBD3L3A6NE82 AC005229.4-201ENST00000610085 2198 ntBASIC17.73■□□□□ 0.43
MBD3L3A6NE82 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.73■□□□□ 0.43
MBD3L3A6NE82 AC007225.1-201ENST00000566331 1836 ntBASIC17.73■□□□□ 0.43
MBD3L3A6NE82 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.73■□□□□ 0.43
MBD3L3A6NE82 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD3L3A6NE82 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD3L3A6NE82 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MBD3L3A6NE82 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.73■□□□□ 0.43
MBD3L3A6NE82 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.73■□□□□ 0.43
MBD3L3A6NE82 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.73■□□□□ 0.43
MBD3L3A6NE82 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
MBD3L3A6NE82 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD3L3A6NE82 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.73■□□□□ 0.43
MBD3L3A6NE82 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MBD3L3A6NE82 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.73■□□□□ 0.43
MBD3L3A6NE82 KRT17P2-201ENST00000300992 1314 ntBASIC17.72■□□□□ 0.43
MBD3L3A6NE82 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD3L3A6NE82 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD3L3A6NE82 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD3L3A6NE82 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD3L3A6NE82 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD3L3A6NE82 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MBD3L3A6NE82 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD3L3A6NE82 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
MBD3L3A6NE82 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.72■□□□□ 0.43
MBD3L3A6NE82 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms