Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
TRAV8-4A0A0B4J246 AC018445.3-201ENST00000624177 1945 ntBASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 AL158211.5-201ENST00000623583 2518 ntBASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 AC138907.5-202ENST00000569484 235 ntBASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-4A0A0B4J246 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 YBX1P1-201ENST00000445822 960 ntBASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 KRT16P2-201ENST00000414673 1423 ntBASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 NFIC-211ENST00000641145 8399 ntBASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV8-4A0A0B4J246 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV8-4A0A0B4J246 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV8-4A0A0B4J246 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms