Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 AL139274.1-201ENST00000402374 936 ntBASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 CCNYL3-201ENST00000407030 998 ntBASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 SRGAP3-AS3-201ENST00000432981 1223 ntTSL 2 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 GAS5-219ENST00000449289 542 ntTSL 3 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 RBMY3AP-201ENST00000449381 1145 ntBASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 MCHR2-AS1-204ENST00000452482 821 ntTSL 3 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 AC113208.1-201ENST00000497944 318 ntBASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 RN7SKP190-201ENST00000516079 286 ntBASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 MKNK2-211ENST00000591142 875 ntTSL 2 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 AC011476.3-201ENST00000593060 786 ntTSL 5 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 Metazoa_SRP.20-201ENST00000619896 275 ntBASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 AL450226.2-201ENST00000622913 439 ntBASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 AL132796.3-201ENST00000624703 900 ntBASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 AC133552.3-201ENST00000572236 1869 ntBASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCNB1IP1Q9NPC3 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 ZNF887P-201ENST00000431363 1407 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 CYP2C19-202ENST00000480405 1417 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 OR14I1-201ENST00000342623 936 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 TAC1-203ENST00000350485 975 ntTSL 5 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 OR11G2-201ENST00000357366 1038 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 SNORA71D-201ENST00000363484 134 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AC093392.1-201ENST00000366280 340 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 FANK1-201ENST00000368689 522 ntTSL 3 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 RN7SKP207-201ENST00000411204 303 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 RBMS1P1-201ENST00000417216 1156 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 SPCS1-202ENST00000423431 822 ntTSL 3 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 Z74696.1-201ENST00000428208 1123 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 RPS28P8-201ENST00000435020 208 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AL122003.1-201ENST00000435206 784 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 BSNDP4-201ENST00000436076 388 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 RPL7P21-201ENST00000478287 635 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AC008799.1-201ENST00000495909 457 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AC233724.1-201ENST00000503894 233 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 GSTO3P-201ENST00000504733 718 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AC087627.1-201ENST00000522339 993 ntTSL 3 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AL356800.1-201ENST00000553339 735 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AC093283.1-201ENST00000565306 1075 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AC009121.1-201ENST00000574681 1095 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AC138761.2-201ENST00000583878 343 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AC012301.1-201ENST00000586391 581 ntTSL 2 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 ZSCAN26-203ENST00000611552 1030 ntTSL 2 BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 AC245033.3-201ENST00000617986 224 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 RN7SL301P-202ENST00000618767 298 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 MIR6754-201ENST00000621121 66 ntBASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCNB1IP1Q9NPC3 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms