Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC7.88□□□□□ -1.15
TRIM48Q8IWZ4 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC7.88□□□□□ -1.15
TRIM48Q8IWZ4 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM48Q8IWZ4 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.88□□□□□ -1.15
TRIM48Q8IWZ4 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM48Q8IWZ4 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC7.88□□□□□ -1.15
TRIM48Q8IWZ4 AC108451.1-201ENST00000558208 2520 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM48Q8IWZ4 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM48Q8IWZ4 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
TRIM48Q8IWZ4 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC7.88□□□□□ -1.15
TRIM48Q8IWZ4 MFSD8-243ENST00000641695 1455 ntBASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 SCNN1G-201ENST00000300061 3507 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 PUS3-201ENST00000227474 1843 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 ZNF726-202ENST00000334589 847 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 CST13P-201ENST00000376992 428 ntBASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 RNU6-883P-201ENST00000384597 107 ntBASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 AC133644.1-201ENST00000398171 937 ntBASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 ATP5F1P6-201ENST00000402768 767 ntBASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 RN7SKP26-201ENST00000410247 293 ntBASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 AC098828.1-201ENST00000436164 440 ntBASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 AL022721.1-201ENST00000436521 505 ntBASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 HNRNPA1P44-201ENST00000503999 879 ntBASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 MLIP-209ENST00000509997 1032 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 AC138701.1-201ENST00000524329 714 ntBASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 AEBP2-207ENST00000541908 975 ntAPPRIS ALT2 TSL 3 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 LACRT-203ENST00000547511 504 ntAPPRIS ALT2 TSL 3 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 AC073167.1-201ENST00000559303 580 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 LINC01572-203ENST00000563823 563 ntTSL 4 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 DNM1P34-202ENST00000567850 315 ntBASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 MIR3689F-201ENST00000579617 66 ntBASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 TEX26-AS1-211ENST00000589840 865 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 AL049829.3-202ENST00000604278 711 ntBASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 AC135803.1-201ENST00000608748 565 ntBASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 RN7SL3-201ENST00000610674 299 ntBASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 AL049777.1-201ENST00000622740 518 ntBASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 HSPA8P19-201ENST00000505359 1517 ntBASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 UGT2B28-202ENST00000511240 1525 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM48Q8IWZ4 AL022334.1-201ENST00000417397 1726 ntBASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 AC016582.1-202ENST00000636341 2982 ntBASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 ASAP1-IT2-201ENST00000626977 2031 ntBASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 STK32B-204ENST00000510398 3241 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 ZNF192P2-201ENST00000402215 1383 ntBASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 AC073349.2-201ENST00000427545 1603 ntBASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 PSMC1P3-201ENST00000453822 1318 ntBASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 NPM1P31-201ENST00000399021 764 ntBASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 RN7SKP119-201ENST00000410753 273 ntBASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 AL691517.1-201ENST00000440833 1235 ntBASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 AC245047.6-201ENST00000445444 617 ntBASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC7.86□□□□□ -1.15
TRIM48Q8IWZ4 AL591438.2-201ENST00000452635 691 ntBASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms