Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 APOPT1-206ENST00000476323 757 ntTSL 5 BASIC8.01□□□□□ -1.13
SLC1A1P43005 AC087385.2-201ENST00000477729 498 ntBASIC8.01□□□□□ -1.13
SLC1A1P43005 CREM-234ENST00000484283 660 ntTSL 5 BASIC8.01□□□□□ -1.13
SLC1A1P43005 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SLC1A1P43005 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC8.01□□□□□ -1.13
SLC1A1P43005 AP005597.2-201ENST00000526238 341 ntBASIC8.01□□□□□ -1.13
SLC1A1P43005 NDFIP1P1-201ENST00000543144 525 ntBASIC8.01□□□□□ -1.13
SLC1A1P43005 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC8.01□□□□□ -1.13
SLC1A1P43005 AC034105.2-201ENST00000561866 238 ntBASIC8.01□□□□□ -1.13
SLC1A1P43005 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC8.01□□□□□ -1.13
SLC1A1P43005 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC8.01□□□□□ -1.13
SLC1A1P43005 AC005518.2-201ENST00000603254 282 ntBASIC8.01□□□□□ -1.13
SLC1A1P43005 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC8.01□□□□□ -1.13
SLC1A1P43005 YTHDF2P1-201ENST00000604759 1271 ntBASIC8.01□□□□□ -1.13
SLC1A1P43005 AL451054.1-201ENST00000621770 772 ntBASIC8.01□□□□□ -1.13
SLC1A1P43005 AC027348.2-201ENST00000624375 642 ntBASIC8.01□□□□□ -1.13
SLC1A1P43005 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC8.01□□□□□ -1.13
SLC1A1P43005 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC8.01□□□□□ -1.13
SLC1A1P43005 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC8.01□□□□□ -1.13
SLC1A1P43005 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
SLC1A1P43005 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC8.01□□□□□ -1.13
SLC1A1P43005 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC8.01□□□□□ -1.13
SLC1A1P43005 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
SLC1A1P43005 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SLC1A1P43005 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SLC1A1P43005 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.01□□□□□ -1.13
SLC1A1P43005 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
SLC1A1P43005 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SLC1A1P43005 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
SLC1A1P43005 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SLC1A1P43005 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
SLC1A1P43005 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC8□□□□□ -1.13
SLC1A1P43005 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8□□□□□ -1.13
SLC1A1P43005 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC8□□□□□ -1.13
SLC1A1P43005 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8□□□□□ -1.13
SLC1A1P43005 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8□□□□□ -1.13
SLC1A1P43005 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC8□□□□□ -1.13
SLC1A1P43005 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SLC1A1P43005 TGFB2-OT1-201ENST00000625474 1371 ntBASIC8□□□□□ -1.13
SLC1A1P43005 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC8□□□□□ -1.13
SLC1A1P43005 RPL12-201ENST00000361436 633 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SLC1A1P43005 DPM1-201ENST00000371582 1161 ntTSL 1 (best) BASIC8□□□□□ -1.13
SLC1A1P43005 LARP1P1-201ENST00000407692 292 ntBASIC8□□□□□ -1.13
SLC1A1P43005 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC8□□□□□ -1.13
SLC1A1P43005 VDAC1P2-201ENST00000423609 850 ntBASIC8□□□□□ -1.13
SLC1A1P43005 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC8□□□□□ -1.13
SLC1A1P43005 RANP5-201ENST00000427731 655 ntBASIC8□□□□□ -1.13
SLC1A1P43005 VN1R35P-201ENST00000428102 693 ntBASIC8□□□□□ -1.13
SLC1A1P43005 FAF2P1-201ENST00000429974 1298 ntBASIC8□□□□□ -1.13
SLC1A1P43005 FTH1P10-202ENST00000430907 550 ntBASIC8□□□□□ -1.13
SLC1A1P43005 RPL35P8-201ENST00000433284 337 ntBASIC8□□□□□ -1.13
SLC1A1P43005 AC239860.1-201ENST00000444680 1270 ntBASIC8□□□□□ -1.13
SLC1A1P43005 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC8□□□□□ -1.13
SLC1A1P43005 RN7SL702P-201ENST00000488394 292 ntBASIC8□□□□□ -1.13
SLC1A1P43005 AC079768.1-201ENST00000503181 711 ntBASIC8□□□□□ -1.13
SLC1A1P43005 AC084871.2-201ENST00000503355 464 ntBASIC8□□□□□ -1.13
SLC1A1P43005 LINC00499-203ENST00000510736 587 ntTSL 5 BASIC8□□□□□ -1.13
SLC1A1P43005 IGHVII-22-1-201ENST00000517888 265 ntBASIC8□□□□□ -1.13
SLC1A1P43005 OSTCP1-202ENST00000522287 1195 ntTSL 1 (best) BASIC8□□□□□ -1.13
SLC1A1P43005 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC8□□□□□ -1.13
SLC1A1P43005 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC8□□□□□ -1.13
SLC1A1P43005 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC8□□□□□ -1.13
SLC1A1P43005 RN7SL155P-201ENST00000581538 263 ntBASIC8□□□□□ -1.13
SLC1A1P43005 DTNA-220ENST00000590831 847 ntTSL 2 BASIC8□□□□□ -1.13
SLC1A1P43005 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SLC1A1P43005 AL035422.2-201ENST00000603059 565 ntBASIC8□□□□□ -1.13
SLC1A1P43005 OR13Z2P-201ENST00000606338 555 ntBASIC8□□□□□ -1.13
SLC1A1P43005 AL021807.1-201ENST00000607175 565 ntBASIC8□□□□□ -1.13
SLC1A1P43005 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC8□□□□□ -1.13
SLC1A1P43005 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC8□□□□□ -1.13
SLC1A1P43005 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8□□□□□ -1.13
SLC1A1P43005 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC8□□□□□ -1.13
SLC1A1P43005 FLJ42393-201ENST00000623801 2270 ntBASIC8□□□□□ -1.13
SLC1A1P43005 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC8□□□□□ -1.13
SLC1A1P43005 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
SLC1A1P43005 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
SLC1A1P43005 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC8□□□□□ -1.13
SLC1A1P43005 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC8□□□□□ -1.13
SLC1A1P43005 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
SLC1A1P43005 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
SLC1A1P43005 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SLC1A1P43005 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SLC1A1P43005 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC7.99□□□□□ -1.13
SLC1A1P43005 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
SLC1A1P43005 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SLC1A1P43005 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SLC1A1P43005 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SLC1A1P43005 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
SLC1A1P43005 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SLC1A1P43005 AL023806.3-201ENST00000638502 2704 ntBASIC7.99□□□□□ -1.13
SLC1A1P43005 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SLC1A1P43005 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
SLC1A1P43005 TMCO5A-201ENST00000319669 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
SLC1A1P43005 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SLC1A1P43005 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC7.99□□□□□ -1.13
SLC1A1P43005 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.99□□□□□ -1.13
SLC1A1P43005 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC7.99□□□□□ -1.13
SLC1A1P43005 LINC00853-201ENST00000429328 661 ntTSL 2 BASIC7.99□□□□□ -1.13
SLC1A1P43005 AC012494.1-201ENST00000439259 1103 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SLC1A1P43005 AC092570.2-201ENST00000452117 1143 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms