Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC8.4□□□□□ -1.06
UBE4BO95155 CASC19-208ENST00000641056 1292 ntBASIC8.4□□□□□ -1.06
UBE4BO95155 CASC19-227ENST00000641411 1285 ntBASIC8.4□□□□□ -1.06
UBE4BO95155 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
UBE4BO95155 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
UBE4BO95155 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
UBE4BO95155 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC8.4□□□□□ -1.06
UBE4BO95155 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
UBE4BO95155 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
UBE4BO95155 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
UBE4BO95155 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
UBE4BO95155 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.07
UBE4BO95155 LRRC2-AS1-201ENST00000599511 2291 ntBASIC8.4□□□□□ -1.07
UBE4BO95155 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.07
UBE4BO95155 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
UBE4BO95155 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
UBE4BO95155 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
UBE4BO95155 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
UBE4BO95155 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
UBE4BO95155 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
UBE4BO95155 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.39□□□□□ -1.07
UBE4BO95155 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
UBE4BO95155 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.39□□□□□ -1.07
UBE4BO95155 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
UBE4BO95155 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC8.39□□□□□ -1.07
UBE4BO95155 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC8.39□□□□□ -1.07
UBE4BO95155 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.39□□□□□ -1.07
UBE4BO95155 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
UBE4BO95155 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
UBE4BO95155 AL390195.2-201ENST00000564771 2023 ntBASIC8.39□□□□□ -1.07
UBE4BO95155 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
UBE4BO95155 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
UBE4BO95155 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
UBE4BO95155 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
UBE4BO95155 RNA5SP79-201ENST00000365193 109 ntBASIC8.39□□□□□ -1.07
UBE4BO95155 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
UBE4BO95155 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
UBE4BO95155 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC8.39□□□□□ -1.07
UBE4BO95155 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC8.39□□□□□ -1.07
UBE4BO95155 DDX11L10-201ENST00000430178 571 ntBASIC8.39□□□□□ -1.07
UBE4BO95155 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC8.39□□□□□ -1.07
UBE4BO95155 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC8.39□□□□□ -1.07
UBE4BO95155 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC8.39□□□□□ -1.07
UBE4BO95155 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC8.39□□□□□ -1.07
UBE4BO95155 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC8.39□□□□□ -1.07
UBE4BO95155 FLJ46284-202ENST00000521148 496 ntTSL 3 BASIC8.39□□□□□ -1.07
UBE4BO95155 AP003385.2-201ENST00000524910 973 ntBASIC8.39□□□□□ -1.07
UBE4BO95155 AP006437.1-202ENST00000530327 933 ntBASIC8.39□□□□□ -1.07
UBE4BO95155 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
UBE4BO95155 AP000619.1-201ENST00000540293 1000 ntBASIC8.39□□□□□ -1.07
UBE4BO95155 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
UBE4BO95155 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC8.39□□□□□ -1.07
UBE4BO95155 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC8.39□□□□□ -1.07
UBE4BO95155 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC8.39□□□□□ -1.07
UBE4BO95155 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC8.39□□□□□ -1.07
UBE4BO95155 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC8.39□□□□□ -1.07
UBE4BO95155 CRYAB-216ENST00000616970 977 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
UBE4BO95155 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC8.39□□□□□ -1.07
UBE4BO95155 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
UBE4BO95155 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC8.39□□□□□ -1.07
UBE4BO95155 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
UBE4BO95155 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
UBE4BO95155 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
UBE4BO95155 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC8.39□□□□□ -1.07
UBE4BO95155 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.39□□□□□ -1.07
UBE4BO95155 AL008638.3-201ENST00000623027 5182 ntBASIC8.39□□□□□ -1.07
UBE4BO95155 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.38□□□□□ -1.07
UBE4BO95155 NACA-216ENST00000550952 2922 ntTSL 2 BASIC8.38□□□□□ -1.07
UBE4BO95155 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC8.38□□□□□ -1.07
UBE4BO95155 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
UBE4BO95155 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
UBE4BO95155 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.38□□□□□ -1.07
UBE4BO95155 AC051619.3-201ENST00000560646 2426 ntBASIC8.38□□□□□ -1.07
UBE4BO95155 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC8.38□□□□□ -1.07
UBE4BO95155 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
UBE4BO95155 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
UBE4BO95155 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC8.38□□□□□ -1.07
UBE4BO95155 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC8.38□□□□□ -1.07
UBE4BO95155 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
UBE4BO95155 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
UBE4BO95155 RNU1-122P-201ENST00000365538 156 ntBASIC8.38□□□□□ -1.07
UBE4BO95155 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
UBE4BO95155 OR4F7P-201ENST00000402444 931 ntBASIC8.38□□□□□ -1.07
UBE4BO95155 AL139806.1-201ENST00000403057 1002 ntBASIC8.38□□□□□ -1.07
UBE4BO95155 OR4F1P-201ENST00000405102 938 ntBASIC8.38□□□□□ -1.07
UBE4BO95155 U3.31-201ENST00000408113 216 ntBASIC8.38□□□□□ -1.07
UBE4BO95155 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC8.38□□□□□ -1.07
UBE4BO95155 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
UBE4BO95155 OR4F2P-201ENST00000424047 938 ntBASIC8.38□□□□□ -1.07
UBE4BO95155 PYHIN5P-201ENST00000431627 723 ntBASIC8.38□□□□□ -1.07
UBE4BO95155 AL606752.1-201ENST00000435442 666 ntBASIC8.38□□□□□ -1.07
UBE4BO95155 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC8.38□□□□□ -1.07
UBE4BO95155 RN7SL861P-201ENST00000473793 285 ntBASIC8.38□□□□□ -1.07
UBE4BO95155 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC8.38□□□□□ -1.07
UBE4BO95155 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC8.38□□□□□ -1.07
UBE4BO95155 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC8.38□□□□□ -1.07
UBE4BO95155 AP000873.4-201ENST00000528133 905 ntTSL 3 BASIC8.38□□□□□ -1.07
UBE4BO95155 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC8.38□□□□□ -1.07
UBE4BO95155 AL356800.1-201ENST00000553339 735 ntBASIC8.38□□□□□ -1.07
UBE4BO95155 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms