Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 AP002957.1-203ENST00000526091 1897 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 AC002070.1-201ENST00000537366 693 ntTSL 3 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 AC078950.1-202ENST00000542062 562 ntTSL 4 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 PRKCH-211ENST00000555082 2932 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 WWP2-216ENST00000569174 2474 ntTSL 5 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 SMIM11B-201ENST00000612624 1021 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 MDS2-203ENST00000612756 420 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 U4.5-201ENST00000617137 123 ntBASIC9.86□□□□□ -0.83
LRCH3Q96II8 MED15P6-202ENST00000621415 787 ntBASIC9.86□□□□□ -0.83
LRCH3Q96II8 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 SCML2-201ENST00000251900 4200 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 KLHL7-AS1-201ENST00000419813 2564 ntTSL 2 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 ADGRF2-201ENST00000296862 2127 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 STAG3-201ENST00000317296 4198 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 TFDP3-201ENST00000310125 1680 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 RPGR-201ENST00000318842 3108 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 SERINC1-201ENST00000339697 3137 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 TIGIT-206ENST00000486257 3149 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 SYT11-201ENST00000368324 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 ACSL6-212ENST00000431707 2060 ntTSL 5 BASIC9.86□□□□□ -0.83
LRCH3Q96II8 BMS1P4-203ENST00000580790 1913 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 HCRTR2-202ENST00000615358 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 PDE11A-202ENST00000389683 1781 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LRCH3Q96II8 ZNF200-204ENST00000414144 3306 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
LRCH3Q96II8 ATL1-202ENST00000441560 2853 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LRCH3Q96II8 CLDN18-202ENST00000343735 3434 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LRCH3Q96II8 AHNAK2-204ENST00000557457 3436 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LRCH3Q96II8 CAPN11-201ENST00000398776 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LRCH3Q96II8 LINC00470-201ENST00000412816 2031 ntTSL 2 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 JADE1-214ENST00000611140 5648 ntAPPRIS P3 TSL 5 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 WDR93-205ENST00000560294 2293 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 SPECC1-201ENST00000261503 3948 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LRCH3Q96II8 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LRCH3Q96II8 SEC24D-201ENST00000280551 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LRCH3Q96II8 ZNF195-207ENST00000429541 2389 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 URGCP-202ENST00000402306 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
LRCH3Q96II8 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LRCH3Q96II8 CACNB2-202ENST00000324631 3446 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
LRCH3Q96II8 OR56A1-201ENST00000316650 1071 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 Y_RNA.535-201ENST00000384612 99 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 AL590084.1-201ENST00000407885 387 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 IGKV1OR2-3-201ENST00000411475 288 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 VN2R10P-201ENST00000411871 853 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 AL390856.1-201ENST00000412174 628 ntTSL 2 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 AL135924.2-201ENST00000427901 361 ntTSL 3 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 AC019197.1-207ENST00000431341 635 ntTSL 3 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 AL031729.1-201ENST00000433132 192 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 LARP1BP3-201ENST00000437229 869 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 SMYD1-202ENST00000438570 680 ntTSL 2 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 AP000532.1-201ENST00000440999 177 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 PA2G4P1-201ENST00000442248 1197 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 AL591438.2-201ENST00000452635 691 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 MTND1P11-201ENST00000456661 876 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 RN7SL91P-201ENST00000469313 291 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 RN7SL659P-201ENST00000483093 299 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 ADAM3A-206ENST00000484602 1046 ntTSL 2 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 AC079203.1-201ENST00000487972 404 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LRCH3Q96II8 SNRPCP8-201ENST00000514820 211 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 AC025881.1-201ENST00000518851 512 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 AC090099.3-201ENST00000524640 979 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 AL109628.2-201ENST00000554037 201 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 AC126323.1-201ENST00000561706 611 ntTSL 3 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 AC005730.3-201ENST00000583067 366 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 AC005498.1-201ENST00000592125 465 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 IGKV1OR2-9-201ENST00000603957 287 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 AC011416.3-201ENST00000603971 355 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 IGKV1OR2-11-201ENST00000604120 287 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 AC087468.1-201ENST00000604365 630 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 AC002059.1-201ENST00000608014 477 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 AL034428.1-202ENST00000613736 625 ntTSL 5 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 AC022079.2-201ENST00000619739 566 ntBASIC9.85□□□□□ -0.83
LRCH3Q96II8 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 LAMTOR5-AS1-246ENST00000630298 858 ntTSL 5 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 OR56A1-204ENST00000641938 1071 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 LINC01278-205ENST00000609401 2886 ntTSL 2 BASIC9.85□□□□□ -0.83
LRCH3Q96II8 SRPK2-202ENST00000393651 3650 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms