Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AP000705.2-201ENST00000433524 1386 ntBASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 SSBP2-212ENST00000509053 1534 ntTSL 2 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 GC-208ENST00000513476 1567 ntTSL 5 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 OR4P4-202ENST00000641760 2086 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.91□□□□□ -1.14
TRIM48Q8IWZ4 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AC124045.1-201ENST00000606008 1953 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 MAP3K7CL-201ENST00000286791 1725 ntTSL 5 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 RBBP4P5-201ENST00000398583 1266 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AL139274.1-201ENST00000402374 936 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 RAET1K-201ENST00000403651 784 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AL136455.1-201ENST00000441083 1240 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 LINC01284-201ENST00000442994 730 ntTSL 5 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 RPS6P25-201ENST00000464444 748 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AC026254.1-201ENST00000479473 431 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AC112203.1-201ENST00000506315 1020 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 RPL10P19-201ENST00000519013 301 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AC090159.1-201ENST00000525309 806 ntTSL 2 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 C11orf65-203ENST00000525729 1263 ntTSL 2 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 GZMB-205ENST00000526004 819 ntTSL 3 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AP006437.1-202ENST00000530327 933 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AC087280.1-201ENST00000530632 1003 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 FTH1-207ENST00000532601 742 ntTSL 3 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 OR8X1P-201ENST00000534542 869 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AC140658.1-201ENST00000563019 346 ntTSL 5 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AL049840.6-202ENST00000603373 279 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AC005034.2-201ENST00000604464 414 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 BNIP3P31-201ENST00000604515 566 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AC015849.6-201ENST00000605454 474 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 GAPDHP41-201ENST00000613707 975 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 MIR8075-201ENST00000614354 80 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AL669830.1-201ENST00000621457 656 ntBASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 AC007221.2-201ENST00000634367 948 ntTSL 5 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
TRIM48Q8IWZ4 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
TRIM48Q8IWZ4 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
TRIM48Q8IWZ4 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.9□□□□□ -1.15
TRIM48Q8IWZ4 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.9□□□□□ -1.15
TRIM48Q8IWZ4 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
TRIM48Q8IWZ4 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 PAXIP1-AS2-201ENST00000397551 1692 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 HSPD1P10-201ENST00000404829 1676 ntBASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 CU633967.1-204ENST00000624627 1604 ntTSL 2 BASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 AL355312.2-201ENST00000455607 1541 ntTSL 5 BASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 TRIM51EP-201ENST00000524374 1516 ntBASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 BBS4-201ENST00000268057 2490 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 BCDIN3D-201ENST00000333924 3253 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 BIN2P2-201ENST00000503900 1303 ntBASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 CR383656.5-201ENST00000547616 1340 ntBASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 RN7SKP76-201ENST00000364419 323 ntBASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 OR51A6P-201ENST00000418680 1004 ntBASIC7.89□□□□□ -1.15
TRIM48Q8IWZ4 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms