Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC090983.1-201ENST00000623426 3897 ntBASIC8.05□□□□□ -1.12
SLC1A1P43005 AC015871.4-201ENST00000624650 2260 ntBASIC8.05□□□□□ -1.12
SLC1A1P43005 AC090132.1-201ENST00000524071 1480 ntBASIC8.05□□□□□ -1.12
SLC1A1P43005 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SLC1A1P43005 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SLC1A1P43005 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SLC1A1P43005 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
SLC1A1P43005 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
SLC1A1P43005 AP002364.1-201ENST00000623330 3386 ntBASIC8.05□□□□□ -1.12
SLC1A1P43005 MAPK10-333ENST00000641607 2481 ntBASIC8.05□□□□□ -1.12
SLC1A1P43005 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SLC1A1P43005 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SLC1A1P43005 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SLC1A1P43005 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SLC1A1P43005 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
SLC1A1P43005 AL590065.1-201ENST00000603371 4774 ntBASIC8.05□□□□□ -1.12
SLC1A1P43005 AC008498.2-201ENST00000624033 2322 ntBASIC8.04□□□□□ -1.12
SLC1A1P43005 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC8.04□□□□□ -1.12
SLC1A1P43005 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SLC1A1P43005 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.04□□□□□ -1.12
SLC1A1P43005 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC8.04□□□□□ -1.12
SLC1A1P43005 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SLC1A1P43005 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SLC1A1P43005 AC126773.4-201ENST00000612545 3043 ntBASIC8.04□□□□□ -1.12
SLC1A1P43005 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8.04□□□□□ -1.12
SLC1A1P43005 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
SLC1A1P43005 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
SLC1A1P43005 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SLC1A1P43005 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SLC1A1P43005 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SLC1A1P43005 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SLC1A1P43005 RNU4-59P-201ENST00000364447 116 ntBASIC8.04□□□□□ -1.12
SLC1A1P43005 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SLC1A1P43005 LINC01888-202ENST00000457602 574 ntTSL 2 BASIC8.04□□□□□ -1.12
SLC1A1P43005 PA2G4P4-201ENST00000473864 1182 ntBASIC8.04□□□□□ -1.12
SLC1A1P43005 RN7SL687P-201ENST00000480496 285 ntBASIC8.04□□□□□ -1.12
SLC1A1P43005 AC108120.1-201ENST00000506543 991 ntBASIC8.04□□□□□ -1.12
SLC1A1P43005 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC8.04□□□□□ -1.12
SLC1A1P43005 AC113352.1-201ENST00000513196 666 ntBASIC8.04□□□□□ -1.12
SLC1A1P43005 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC8.04□□□□□ -1.12
SLC1A1P43005 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC8.04□□□□□ -1.12
SLC1A1P43005 GZMB-205ENST00000526004 819 ntTSL 3 BASIC8.04□□□□□ -1.12
SLC1A1P43005 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC8.04□□□□□ -1.12
SLC1A1P43005 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC8.04□□□□□ -1.12
SLC1A1P43005 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SLC1A1P43005 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC8.04□□□□□ -1.12
SLC1A1P43005 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SLC1A1P43005 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC8.04□□□□□ -1.12
SLC1A1P43005 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC8.04□□□□□ -1.12
SLC1A1P43005 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC8.04□□□□□ -1.12
SLC1A1P43005 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC8.04□□□□□ -1.12
SLC1A1P43005 AL451085.1-201ENST00000604546 690 ntBASIC8.04□□□□□ -1.12
SLC1A1P43005 MARK3P1-201ENST00000604796 643 ntBASIC8.04□□□□□ -1.12
SLC1A1P43005 AL096855.2-201ENST00000605785 369 ntBASIC8.04□□□□□ -1.12
SLC1A1P43005 AL451054.3-201ENST00000611115 776 ntBASIC8.04□□□□□ -1.12
SLC1A1P43005 AL731556.2-201ENST00000615610 770 ntBASIC8.04□□□□□ -1.12
SLC1A1P43005 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC8.04□□□□□ -1.12
SLC1A1P43005 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC8.04□□□□□ -1.12
SLC1A1P43005 FLII-230ENST00000628188 156 ntTSL 5 BASIC8.04□□□□□ -1.12
SLC1A1P43005 AC087885.1-201ENST00000641910 848 ntBASIC8.04□□□□□ -1.12
SLC1A1P43005 IL15-207ENST00000514653 1388 ntTSL 5 BASIC8.04□□□□□ -1.12
SLC1A1P43005 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC8.04□□□□□ -1.12
SLC1A1P43005 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC8.04□□□□□ -1.12
SLC1A1P43005 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
SLC1A1P43005 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.04□□□□□ -1.12
SLC1A1P43005 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
SLC1A1P43005 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC8.04□□□□□ -1.12
SLC1A1P43005 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SLC1A1P43005 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
SLC1A1P43005 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC8.04□□□□□ -1.12
SLC1A1P43005 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SLC1A1P43005 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.04□□□□□ -1.12
SLC1A1P43005 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC8.04□□□□□ -1.12
SLC1A1P43005 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.04□□□□□ -1.12
SLC1A1P43005 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
SLC1A1P43005 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
SLC1A1P43005 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
SLC1A1P43005 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SLC1A1P43005 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SLC1A1P43005 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.03□□□□□ -1.12
SLC1A1P43005 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
SLC1A1P43005 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
SLC1A1P43005 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
SLC1A1P43005 AC005831.1-201ENST00000624384 1697 ntBASIC8.03□□□□□ -1.12
SLC1A1P43005 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SLC1A1P43005 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
SLC1A1P43005 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC8.03□□□□□ -1.12
SLC1A1P43005 IMPG1-203ENST00000369963 868 ntTSL 5 BASIC8.03□□□□□ -1.12
SLC1A1P43005 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
SLC1A1P43005 MIR555-201ENST00000384987 96 ntBASIC8.03□□□□□ -1.12
SLC1A1P43005 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
SLC1A1P43005 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC8.03□□□□□ -1.12
SLC1A1P43005 AC010983.1-201ENST00000418387 1028 ntTSL 5 BASIC8.03□□□□□ -1.12
SLC1A1P43005 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SLC1A1P43005 AL162595.2-201ENST00000430677 792 ntTSL 3 BASIC8.03□□□□□ -1.12
SLC1A1P43005 SRGAP3-AS3-201ENST00000432981 1223 ntTSL 2 BASIC8.03□□□□□ -1.12
SLC1A1P43005 AC099344.1-201ENST00000433548 492 ntBASIC8.03□□□□□ -1.12
SLC1A1P43005 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SLC1A1P43005 CLUHP5-201ENST00000438421 774 ntBASIC8.03□□□□□ -1.12
SLC1A1P43005 LINC00331-201ENST00000446391 376 ntTSL 5 BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms