Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 AC009948.5-201ENST00000624360 4406 ntBASIC8.16□□□□□ -1.1
LMO3Q8TAP4 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 AL139327.1-201ENST00000382988 348 ntBASIC8.16□□□□□ -1.1
LMO3Q8TAP4 MIR614-201ENST00000385082 90 ntBASIC8.16□□□□□ -1.1
LMO3Q8TAP4 RNA5SP18-201ENST00000390935 121 ntBASIC8.16□□□□□ -1.1
LMO3Q8TAP4 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 AC023141.10-201ENST00000415634 200 ntBASIC8.16□□□□□ -1.1
LMO3Q8TAP4 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 ANKRD54P1-201ENST00000433115 471 ntBASIC8.16□□□□□ -1.1
LMO3Q8TAP4 FTH1P20-201ENST00000434913 548 ntBASIC8.16□□□□□ -1.1
LMO3Q8TAP4 EEF1A1P5-201ENST00000436459 1389 ntBASIC8.16□□□□□ -1.1
LMO3Q8TAP4 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 AC002553.1-201ENST00000442828 802 ntBASIC8.16□□□□□ -1.1
LMO3Q8TAP4 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 AC002463.1-201ENST00000453459 1188 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 RN7SL55P-201ENST00000464534 297 ntBASIC8.16□□□□□ -1.1
LMO3Q8TAP4 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 GCSHP1-201ENST00000512554 484 ntBASIC8.16□□□□□ -1.1
LMO3Q8TAP4 ADI1P2-201ENST00000514945 429 ntBASIC8.16□□□□□ -1.1
LMO3Q8TAP4 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 AL137190.1-201ENST00000603288 282 ntBASIC8.16□□□□□ -1.1
LMO3Q8TAP4 AL109918.2-201ENST00000605188 279 ntBASIC8.16□□□□□ -1.1
LMO3Q8TAP4 AL136141.1-201ENST00000605780 369 ntBASIC8.16□□□□□ -1.1
LMO3Q8TAP4 U47924.1-201ENST00000606539 434 ntBASIC8.16□□□□□ -1.1
LMO3Q8TAP4 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 FAM184A-213ENST00000617072 1251 ntTSL 2 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 AC008957.2-201ENST00000618632 396 ntTSL 5 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 AP003068.4-201ENST00000623192 802 ntBASIC8.16□□□□□ -1.1
LMO3Q8TAP4 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
LMO3Q8TAP4 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 TRIM51HP-202ENST00000530412 1823 ntBASIC8.15□□□□□ -1.1
LMO3Q8TAP4 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 RNA5SP79-201ENST00000365193 109 ntBASIC8.15□□□□□ -1.1
LMO3Q8TAP4 KRT18P52-201ENST00000404956 846 ntBASIC8.15□□□□□ -1.1
LMO3Q8TAP4 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 MED15P8-201ENST00000411601 545 ntBASIC8.15□□□□□ -1.1
LMO3Q8TAP4 RPL34P19-201ENST00000415903 342 ntBASIC8.15□□□□□ -1.1
LMO3Q8TAP4 RPL5P6-201ENST00000425640 886 ntBASIC8.15□□□□□ -1.1
LMO3Q8TAP4 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 RHEBP1-201ENST00000448647 556 ntBASIC8.15□□□□□ -1.1
LMO3Q8TAP4 IGKV1OR2-2-201ENST00000451163 355 ntBASIC8.15□□□□□ -1.1
LMO3Q8TAP4 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC8.15□□□□□ -1.1
LMO3Q8TAP4 RN7SL414P-201ENST00000469545 294 ntBASIC8.15□□□□□ -1.1
LMO3Q8TAP4 PIGA-205ENST00000482148 1092 ntTSL 5 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 RN7SL153P-201ENST00000486501 292 ntBASIC8.15□□□□□ -1.1
LMO3Q8TAP4 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 HEXB-205ENST00000509579 806 ntTSL 2 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 AP000873.4-201ENST00000528133 905 ntTSL 3 BASIC8.15□□□□□ -1.1
LMO3Q8TAP4 DCN-207ENST00000546370 586 ntTSL 3 BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms