Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 OR7A1P-201ENST00000601206 970 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AL590396.2-201ENST00000636511 1041 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 RPL36AP21-202ENST00000639134 430 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 AC131392.2-201ENST00000505635 4332 ntBASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC8.2□□□□□ -1.1
CDK5RAP1Q96SZ6 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AC078795.1-201ENST00000602342 3143 ntBASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 RN7SKP50-201ENST00000364694 315 ntBASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 MYB-206ENST00000420123 1051 ntTSL 5 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 BMS1P12-201ENST00000428213 706 ntBASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 MTATP6P17-201ENST00000431030 672 ntBASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AC025262.1-201ENST00000434563 589 ntTSL 5 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 RPS29P5-201ENST00000452777 171 ntBASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AC234782.3-201ENST00000461229 433 ntBASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 CAB39P1-201ENST00000502277 460 ntBASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AC122713.1-201ENST00000518368 1015 ntBASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AL355076.3-201ENST00000555838 587 ntBASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 BNIP3P39-201ENST00000601077 554 ntBASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AC140658.6-201ENST00000603958 201 ntBASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 C18orf12-201ENST00000623329 537 ntBASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 SERPINB11-209ENST00000624518 573 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AC012557.3-201ENST00000626439 255 ntBASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 GCNT7-202ENST00000617620 1355 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AL049869.1-201ENST00000556933 1402 ntBASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 AL365475.1-201ENST00000565135 1949 ntBASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CDK5RAP1Q96SZ6 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AL136146.1-201ENST00000529830 1667 ntBASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 MAP3K7CL-201ENST00000286791 1725 ntTSL 5 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 FHL1-203ENST00000370676 833 ntTSL 5 BASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 H2AFZP3-201ENST00000394213 387 ntBASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 HNRNPCP2-201ENST00000399515 881 ntBASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 FTH1P26-201ENST00000406512 701 ntBASIC8.18□□□□□ -1.1
CDK5RAP1Q96SZ6 LSM5-202ENST00000409292 538 ntTSL 2 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms