Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 AL035555.1-201ENST00000404462 1790 ntBASIC8.18□□□□□ -1.1
LMO3Q8TAP4 IARS-205ENST00000443024 4341 ntTSL 5 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 NXT2-204ENST00000372107 937 ntTSL 3 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 AMELY-202ENST00000383036 621 ntTSL 5 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 LARP1P1-201ENST00000407692 292 ntBASIC8.18□□□□□ -1.1
LMO3Q8TAP4 RPL4P4-201ENST00000422486 1284 ntBASIC8.18□□□□□ -1.1
LMO3Q8TAP4 AC003071.2-201ENST00000423857 315 ntBASIC8.18□□□□□ -1.1
LMO3Q8TAP4 PYHIN5P-201ENST00000431627 723 ntBASIC8.18□□□□□ -1.1
LMO3Q8TAP4 RPS12P20-201ENST00000464109 380 ntBASIC8.18□□□□□ -1.1
LMO3Q8TAP4 AC117392.1-201ENST00000487061 596 ntBASIC8.18□□□□□ -1.1
LMO3Q8TAP4 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 AP004833.1-201ENST00000507987 1238 ntBASIC8.18□□□□□ -1.1
LMO3Q8TAP4 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 AC008677.3-201ENST00000519146 666 ntBASIC8.18□□□□□ -1.1
LMO3Q8TAP4 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 RBM4-213ENST00000578778 582 ntTSL 4 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 MIR4642-201ENST00000583943 82 ntBASIC8.18□□□□□ -1.1
LMO3Q8TAP4 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 SNRPCP20-201ENST00000588011 210 ntBASIC8.18□□□□□ -1.1
LMO3Q8TAP4 AC100843.2-201ENST00000589084 324 ntTSL 5 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 AC025162.2-201ENST00000619602 560 ntBASIC8.18□□□□□ -1.1
LMO3Q8TAP4 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
LMO3Q8TAP4 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 CREM-208ENST00000361599 2170 ntTSL 5 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 AC015871.4-201ENST00000624650 2260 ntBASIC8.17□□□□□ -1.1
LMO3Q8TAP4 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 RNU1-21P-201ENST00000363327 163 ntBASIC8.17□□□□□ -1.1
LMO3Q8TAP4 MIR498-201ENST00000385134 124 ntBASIC8.17□□□□□ -1.1
LMO3Q8TAP4 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 RN7SKP225-201ENST00000410405 352 ntBASIC8.17□□□□□ -1.1
LMO3Q8TAP4 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 AC096922.1-201ENST00000461635 651 ntBASIC8.17□□□□□ -1.1
LMO3Q8TAP4 RN7SL263P-201ENST00000467969 290 ntBASIC8.17□□□□□ -1.1
LMO3Q8TAP4 AC005550.2-201ENST00000476382 318 ntBASIC8.17□□□□□ -1.1
LMO3Q8TAP4 RN7SL635P-201ENST00000492123 296 ntBASIC8.17□□□□□ -1.1
LMO3Q8TAP4 RN7SL869P-201ENST00000497032 300 ntBASIC8.17□□□□□ -1.1
LMO3Q8TAP4 AC006070.1-201ENST00000508151 193 ntBASIC8.17□□□□□ -1.1
LMO3Q8TAP4 AC233724.10-201ENST00000510454 409 ntBASIC8.17□□□□□ -1.1
LMO3Q8TAP4 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 AC006206.2-201ENST00000537192 992 ntTSL 4 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 AL391903.2-201ENST00000614532 247 ntBASIC8.17□□□□□ -1.1
LMO3Q8TAP4 MIAT_exon1.1-201ENST00000617016 135 ntBASIC8.17□□□□□ -1.1
LMO3Q8TAP4 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC8.17□□□□□ -1.1
LMO3Q8TAP4 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms