Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 RN7SL496P-201ENST00000470372 290 ntBASIC7.34□□□□□ -1.23
SCN2BO60939 RN7SL272P-201ENST00000487762 289 ntBASIC7.34□□□□□ -1.23
SCN2BO60939 AC008638.2-201ENST00000503840 715 ntBASIC7.34□□□□□ -1.23
SCN2BO60939 OR7E129P-201ENST00000504655 968 ntBASIC7.34□□□□□ -1.23
SCN2BO60939 AC006499.1-201ENST00000511870 850 ntBASIC7.34□□□□□ -1.23
SCN2BO60939 GAPDHP44-201ENST00000513513 1007 ntBASIC7.34□□□□□ -1.23
SCN2BO60939 AP001636.1-201ENST00000531997 1122 ntBASIC7.34□□□□□ -1.23
SCN2BO60939 LACRT-203ENST00000547511 504 ntAPPRIS ALT2 TSL 3 BASIC7.34□□□□□ -1.23
SCN2BO60939 OR4N1P-201ENST00000554847 949 ntBASIC7.34□□□□□ -1.23
SCN2BO60939 CIPC-206ENST00000555611 599 ntTSL 4 BASIC7.34□□□□□ -1.23
SCN2BO60939 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC7.34□□□□□ -1.23
SCN2BO60939 MIR4682-201ENST00000580643 80 ntBASIC7.34□□□□□ -1.23
SCN2BO60939 MIR4266-201ENST00000583300 55 ntBASIC7.34□□□□□ -1.23
SCN2BO60939 AF146191.1-201ENST00000604941 889 ntBASIC7.34□□□□□ -1.23
SCN2BO60939 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC7.34□□□□□ -1.23
SCN2BO60939 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCN2BO60939 MIR6754-201ENST00000621121 66 ntBASIC7.34□□□□□ -1.23
SCN2BO60939 OR5G5P-204ENST00000627642 621 ntBASIC7.34□□□□□ -1.23
SCN2BO60939 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
SCN2BO60939 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC7.34□□□□□ -1.23
SCN2BO60939 AC119674.1-201ENST00000641611 1210 ntBASIC7.34□□□□□ -1.23
SCN2BO60939 SLC2A14-215ENST00000542546 3120 ntTSL 5 BASIC7.34□□□□□ -1.23
SCN2BO60939 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCN2BO60939 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.34□□□□□ -1.23
SCN2BO60939 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SCN2BO60939 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
SCN2BO60939 MAPK10-290ENST00000641237 2826 ntBASIC7.34□□□□□ -1.23
SCN2BO60939 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCN2BO60939 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.34□□□□□ -1.23
SCN2BO60939 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
SCN2BO60939 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCN2BO60939 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.24
SCN2BO60939 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.34□□□□□ -1.24
SCN2BO60939 AC015871.4-201ENST00000624650 2260 ntBASIC7.34□□□□□ -1.24
SCN2BO60939 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
SCN2BO60939 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
SCN2BO60939 MAPK10-333ENST00000641607 2481 ntBASIC7.34□□□□□ -1.24
SCN2BO60939 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.34□□□□□ -1.24
SCN2BO60939 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.34□□□□□ -1.24
SCN2BO60939 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.34□□□□□ -1.24
SCN2BO60939 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC7.33□□□□□ -1.24
SCN2BO60939 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCN2BO60939 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC7.33□□□□□ -1.24
SCN2BO60939 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
SCN2BO60939 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.33□□□□□ -1.24
SCN2BO60939 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCN2BO60939 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
SCN2BO60939 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCN2BO60939 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCN2BO60939 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCN2BO60939 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCN2BO60939 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
SCN2BO60939 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
SCN2BO60939 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCN2BO60939 CASC20-201ENST00000415932 1484 ntTSL 5 BASIC7.33□□□□□ -1.24
SCN2BO60939 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.33□□□□□ -1.24
SCN2BO60939 SNORA70I-201ENST00000384544 135 ntBASIC7.33□□□□□ -1.24
SCN2BO60939 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
SCN2BO60939 AC034228.1-201ENST00000424244 923 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCN2BO60939 SRGAP3-AS3-201ENST00000432981 1223 ntTSL 2 BASIC7.33□□□□□ -1.24
SCN2BO60939 AC016734.1-201ENST00000436998 654 ntBASIC7.33□□□□□ -1.24
SCN2BO60939 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC7.33□□□□□ -1.24
SCN2BO60939 AC234782.3-201ENST00000461229 433 ntBASIC7.33□□□□□ -1.24
SCN2BO60939 SUMO2P17-201ENST00000504438 285 ntBASIC7.33□□□□□ -1.24
SCN2BO60939 DKK2-202ENST00000510463 908 ntTSL 3 BASIC7.33□□□□□ -1.24
SCN2BO60939 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCN2BO60939 C8orf87-201ENST00000521906 588 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCN2BO60939 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.33□□□□□ -1.24
SCN2BO60939 SOX5-213ENST00000541847 758 ntTSL 3 BASIC7.33□□□□□ -1.24
SCN2BO60939 AL133520.1-201ENST00000610430 700 ntBASIC7.33□□□□□ -1.24
SCN2BO60939 SMIM11B-201ENST00000612624 1021 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCN2BO60939 MED15P6-202ENST00000621415 787 ntBASIC7.33□□□□□ -1.24
SCN2BO60939 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC7.33□□□□□ -1.24
SCN2BO60939 AC099667.1-201ENST00000624222 469 ntBASIC7.33□□□□□ -1.24
SCN2BO60939 AC105339.4-201ENST00000624471 737 ntBASIC7.33□□□□□ -1.24
SCN2BO60939 AC073488.5-201ENST00000631993 754 ntBASIC7.33□□□□□ -1.24
SCN2BO60939 AC024475.4-201ENST00000635144 1206 ntTSL 5 BASIC7.33□□□□□ -1.24
SCN2BO60939 MIR3120-201ENST00000636555 81 ntBASIC7.33□□□□□ -1.24
SCN2BO60939 TPK1-214ENST00000639328 826 ntTSL 5 BASIC7.33□□□□□ -1.24
SCN2BO60939 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.33□□□□□ -1.24
SCN2BO60939 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCN2BO60939 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCN2BO60939 DNAAF4-203ENST00000448430 1445 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCN2BO60939 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCN2BO60939 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.33□□□□□ -1.24
SCN2BO60939 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
SCN2BO60939 AC010886.1-201ENST00000437380 2869 ntBASIC7.33□□□□□ -1.24
SCN2BO60939 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCN2BO60939 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCN2BO60939 AC126773.4-201ENST00000612545 3043 ntBASIC7.33□□□□□ -1.24
SCN2BO60939 MAPK10-313ENST00000641405 2469 ntBASIC7.33□□□□□ -1.24
SCN2BO60939 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCN2BO60939 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms