Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 RN7SL135P-201ENST00000490144 278 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 RN7SL464P-201ENST00000492743 297 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 AC114964.1-201ENST00000502306 1111 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 BX293995.1-201ENST00000502880 755 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 RNU6-551P-201ENST00000516661 103 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 OR4A9P-201ENST00000526326 944 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 AC007570.1-201ENST00000539987 603 ntTSL 3 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 AC013452.2-201ENST00000557910 743 ntTSL 5 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 SRP68P1-201ENST00000584247 269 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 CD209-208ENST00000593821 807 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SNX18Q96RF0 CARSP1-201ENST00000603171 889 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 AL139220.2-217ENST00000609027 940 ntTSL 5 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 AC018926.2-201ENST00000611214 498 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 MAGEB3-202ENST00000620842 1129 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 AC010809.3-201ENST00000621310 641 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNX18Q96RF0 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNX18Q96RF0 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNX18Q96RF0 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNX18Q96RF0 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNX18Q96RF0 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SNX18Q96RF0 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNX18Q96RF0 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SNX18Q96RF0 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 AC023632.6-201ENST00000624338 2177 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SNX18Q96RF0 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
SNX18Q96RF0 AC245505.2-201ENST00000553572 3055 ntBASIC7.29□□□□□ -1.24
SNX18Q96RF0 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 C8orf48-201ENST00000297324 1445 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 AC008033.3-201ENST00000612531 1407 ntBASIC7.28□□□□□ -1.24
SNX18Q96RF0 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 AL139811.2-201ENST00000373465 1630 ntBASIC7.28□□□□□ -1.24
SNX18Q96RF0 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 RNA5SP336-201ENST00000364189 117 ntBASIC7.28□□□□□ -1.24
SNX18Q96RF0 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 SNORA30-201ENST00000384028 129 ntBASIC7.28□□□□□ -1.24
SNX18Q96RF0 RNU1-8P-201ENST00000384328 165 ntBASIC7.28□□□□□ -1.24
SNX18Q96RF0 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 LINC01644-201ENST00000405369 984 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 GACAT1-201ENST00000419650 577 ntTSL 4 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 AC008155.1-201ENST00000421078 329 ntBASIC7.28□□□□□ -1.24
SNX18Q96RF0 AC073342.1-201ENST00000427392 592 ntTSL 5 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 KRT18P53-201ENST00000431919 117 ntBASIC7.28□□□□□ -1.24
SNX18Q96RF0 HAUS1P2-201ENST00000439908 784 ntBASIC7.28□□□□□ -1.24
SNX18Q96RF0 AL353754.1-201ENST00000440219 340 ntBASIC7.28□□□□□ -1.24
SNX18Q96RF0 AL035417.1-201ENST00000442754 214 ntBASIC7.28□□□□□ -1.24
SNX18Q96RF0 AC017099.1-201ENST00000448261 1028 ntBASIC7.28□□□□□ -1.24
SNX18Q96RF0 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 AC122713.1-201ENST00000518368 1015 ntBASIC7.28□□□□□ -1.24
SNX18Q96RF0 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 NTAN1P3-201ENST00000535885 715 ntBASIC7.28□□□□□ -1.24
SNX18Q96RF0 AC019209.1-201ENST00000544399 486 ntTSL 2 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 ZNF771-203ENST00000564550 1187 ntTSL 5 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 LINC02132-201ENST00000598933 750 ntTSL 2 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 AC005520.3-201ENST00000602874 370 ntBASIC7.28□□□□□ -1.24
SNX18Q96RF0 SNX29P2-204ENST00000603801 875 ntBASIC7.28□□□□□ -1.24
SNX18Q96RF0 7SK.12-201ENST00000612820 244 ntBASIC7.28□□□□□ -1.24
SNX18Q96RF0 AC239859.6-201ENST00000622095 213 ntBASIC7.28□□□□□ -1.24
SNX18Q96RF0 LINC01176-202ENST00000628121 716 ntTSL 3 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SNX18Q96RF0 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.28□□□□□ -1.24
SNX18Q96RF0 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms