Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RNU2-5P-201ENST00000410533 180 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 ARL2BPP3-201ENST00000421226 480 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 KRT223P-201ENST00000422957 519 ntTSL 2 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 OR52J2P-201ENST00000427973 939 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 AL139220.2-213ENST00000431800 674 ntTSL 3 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 AL772284.1-201ENST00000443421 905 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 MTND4P19-201ENST00000446659 478 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 RN7SL395P-201ENST00000462960 291 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 RN7SL496P-201ENST00000470372 290 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 RN7SL505P-201ENST00000482644 293 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LRCH3Q96II8 AC093162.2-201ENST00000501107 704 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 AC022034.4-201ENST00000521930 469 ntTSL 3 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 NANOGP1-201ENST00000525030 915 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 NANOG-202ENST00000526286 870 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LRCH3Q96II8 AC105219.3-201ENST00000527579 374 ntTSL 2 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 NANOGP8-201ENST00000528386 918 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 HNF1A-AS1-202ENST00000535301 536 ntTSL 4 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 AC123904.3-201ENST00000547218 814 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 AC083805.2-201ENST00000549683 610 ntTSL 2 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 NANOGP7-201ENST00000554450 918 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 AC079171.1-201ENST00000568788 914 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 AC090912.1-201ENST00000578831 570 ntTSL 4 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 AC138761.2-201ENST00000583878 343 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 SRP68P1-201ENST00000584247 269 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 AC009994.1-201ENST00000606889 253 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 NANOGP8-202ENST00000629403 870 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LRCH3Q96II8 AC040162.3-201ENST00000572067 3907 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 GOT2P1-201ENST00000440922 1309 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 EEF1A1P21-201ENST00000512363 1344 ntBASIC9.96□□□□□ -0.82
LRCH3Q96II8 UBE2D3-208ENST00000394803 2227 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LRCH3Q96II8 CLIP1-201ENST00000302528 5833 ntAPPRIS P4 TSL 5 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 PLEKHB2-201ENST00000234115 4208 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
LRCH3Q96II8 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LRCH3Q96II8 ABCA9-207ENST00000495634 1428 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LRCH3Q96II8 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LRCH3Q96II8 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 NONO-201ENST00000276079 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LRCH3Q96II8 CASP12-203ENST00000422698 1685 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 LINC01310-201ENST00000380981 4015 ntTSL 2 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 HACL1-207ENST00000451445 1734 ntTSL 2 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 PAH-215ENST00000553106 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LRCH3Q96II8 YME1L1-209ENST00000613434 4127 ntTSL 2 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 DCTN4-215ENST00000627368 1774 ntTSL 5 BASIC9.96□□□□□ -0.82
LRCH3Q96II8 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LRCH3Q96II8 STEAP3-203ENST00000393110 4262 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LRCH3Q96II8 ZNF207-202ENST00000342555 1905 ntTSL 5 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 SLC9B2-203ENST00000503103 1911 ntTSL 2 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 ELP3-201ENST00000256398 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 PARM1-201ENST00000307428 5011 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 DEPDC5-201ENST00000382111 5212 ntTSL 5 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 YPEL4-203ENST00000524669 4000 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 NMT1-201ENST00000258960 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 SMARCA2-263ENST00000637806 7061 ntTSL 5 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 ZNF184-201ENST00000211936 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 ITGA6-207ENST00000458358 3261 ntTSL 5 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 SLC12A5-205ENST00000454036 3593 ntTSL 5 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 KDM2A-201ENST00000308783 3666 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 MICAL2-231ENST00000537344 3774 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 TAC1-203ENST00000350485 975 ntTSL 5 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 RAB19-201ENST00000356407 822 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
LRCH3Q96II8 CREM-213ENST00000374734 711 ntTSL 5 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 ATP5F1P4-201ENST00000397288 746 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 PHBP7-201ENST00000415677 814 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 RPL13AP7-201ENST00000425147 611 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 LINC01006-203ENST00000425712 661 ntTSL 2 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 AC097721.1-201ENST00000427150 1253 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 AL136231.1-201ENST00000429407 730 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 AC108448.2-201ENST00000431546 730 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 FGF7P5-201ENST00000441829 291 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 AC073465.3-201ENST00000448468 405 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 RN7SL508P-201ENST00000464472 303 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 CREM-231ENST00000479070 939 ntTSL 5 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 HMGB3P13-201ENST00000511263 607 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 RNU6-718P-201ENST00000516166 105 ntBASIC9.95□□□□□ -0.82
LRCH3Q96II8 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC9.95□□□□□ -0.82
LRCH3Q96II8 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms