Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DRB4X5D2U9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.15■□□□□ 0.02
HLA-DRB4X5D2U9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DRB4X5D2U9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DRB4X5D2U9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLA-DRB4X5D2U9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 AC004911.1-201ENST00000416316 871 ntBASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 CYP2T1P-201ENST00000432607 1285 ntBASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 RARRES2P4-201ENST00000514074 484 ntBASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 AC069236.1-201ENST00000604339 616 ntBASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 AC080038.1-201ENST00000611274 1154 ntBASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 AC008694.1-202ENST00000636953 945 ntBASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.14■□□□□ 0.01
HLA-DRB4X5D2U9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB4X5D2U9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB4X5D2U9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB4X5D2U9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HLA-DRB4X5D2U9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB4X5D2U9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB4X5D2U9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DRB4X5D2U9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB4X5D2U9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DRB4X5D2U9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HLA-DRB4X5D2U9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HLA-DRB4X5D2U9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB4X5D2U9 AL020996.1-203ENST00000536896 2307 ntBASIC15.13■□□□□ 0.01
HLA-DRB4X5D2U9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.13■□□□□ 0.01
HLA-DRB4X5D2U9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.13■□□□□ 0.01
HLA-DRB4X5D2U9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB4X5D2U9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLA-DRB4X5D2U9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HLA-DRB4X5D2U9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 AC087633.2-202ENST00000565166 1439 ntBASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 AC100791.3-201ENST00000617619 330 ntBASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 AC073111.5-205ENST00000641717 521 ntBASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 CYP21A1P-202ENST00000354927 1481 ntBASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HLA-DRB4X5D2U9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 AP005212.1-201ENST00000581547 1997 ntBASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HLA-DRB4X5D2U9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms