Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 AL135905.2-201ENST00000584934 1404 ntBASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 AC124016.1-201ENST00000609552 612 ntBASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PCDHGA9Q9Y5G4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 AC120498.8-201ENST00000614275 531 ntBASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA9Q9Y5G4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 AC239809.2-201ENST00000415381 517 ntBASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 BX088651.1-201ENST00000540551 451 ntBASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 AC005829.2-201ENST00000571422 1056 ntBASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA9Q9Y5G4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGA9Q9Y5G4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGA9Q9Y5G4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDHGA9Q9Y5G4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHGA9Q9Y5G4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA9Q9Y5G4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA9Q9Y5G4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA9Q9Y5G4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA9Q9Y5G4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA9Q9Y5G4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHGA9Q9Y5G4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHGA9Q9Y5G4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
PCDHGA9Q9Y5G4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHGA9Q9Y5G4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA9Q9Y5G4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA9Q9Y5G4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHGA9Q9Y5G4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHGA9Q9Y5G4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 AC110285.5-201ENST00000611501 352 ntBASIC18.82■□□□□ 0.6
PCDHGA9Q9Y5G4 AL023875.1-201ENST00000640777 796 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms