Protein–RNA interactions for Protein: Q9UQP3

TNN, Tenascin-N, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNQ9UQP3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
TNNQ9UQP3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
TNNQ9UQP3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TNNQ9UQP3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TNNQ9UQP3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
TNNQ9UQP3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TNNQ9UQP3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.71■■□□□ 1.71
TNNQ9UQP3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC25.71■■□□□ 1.71
TNNQ9UQP3 NCF1B-203ENST00000435988 1254 ntBASIC25.71■■□□□ 1.71
TNNQ9UQP3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TNNQ9UQP3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC25.71■■□□□ 1.71
TNNQ9UQP3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
TNNQ9UQP3 MKRN4P-201ENST00000444706 1521 ntBASIC25.71■■□□□ 1.71
TNNQ9UQP3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TNNQ9UQP3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
TNNQ9UQP3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
TNNQ9UQP3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
TNNQ9UQP3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TNNQ9UQP3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
TNNQ9UQP3 BX276092.2-201ENST00000417668 665 ntBASIC25.7■■□□□ 1.7
TNNQ9UQP3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC25.7■■□□□ 1.7
TNNQ9UQP3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.7■■□□□ 1.7
TNNQ9UQP3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TNNQ9UQP3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.7■■□□□ 1.7
TNNQ9UQP3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
TNNQ9UQP3 AL691432.2-201ENST00000607222 2038 ntBASIC25.7■■□□□ 1.7
TNNQ9UQP3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
TNNQ9UQP3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TNNQ9UQP3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC25.69■■□□□ 1.7
TNNQ9UQP3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC25.69■■□□□ 1.7
TNNQ9UQP3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC25.69■■□□□ 1.7
TNNQ9UQP3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC25.69■■□□□ 1.7
TNNQ9UQP3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TNNQ9UQP3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
TNNQ9UQP3 OR2A1-AS1-201ENST00000462305 773 ntBASIC25.69■■□□□ 1.7
TNNQ9UQP3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC25.69■■□□□ 1.7
TNNQ9UQP3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TNNQ9UQP3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TNNQ9UQP3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
TNNQ9UQP3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TNNQ9UQP3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
TNNQ9UQP3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TNNQ9UQP3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC25.68■■□□□ 1.7
TNNQ9UQP3 MIPEPP3-201ENST00000412105 444 ntBASIC25.68■■□□□ 1.7
TNNQ9UQP3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.68■■□□□ 1.7
TNNQ9UQP3 AL138781.1-201ENST00000566567 1274 ntBASIC25.68■■□□□ 1.7
TNNQ9UQP3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
TNNQ9UQP3 AL121832.2-201ENST00000610979 668 ntBASIC25.68■■□□□ 1.7
TNNQ9UQP3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TNNQ9UQP3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC25.68■■□□□ 1.7
TNNQ9UQP3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
TNNQ9UQP3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TNNQ9UQP3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
TNNQ9UQP3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TNNQ9UQP3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
TNNQ9UQP3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC25.67■■□□□ 1.7
TNNQ9UQP3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC25.67■■□□□ 1.7
TNNQ9UQP3 TSPY6P-201ENST00000448518 926 ntBASIC25.67■■□□□ 1.7
TNNQ9UQP3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC25.67■■□□□ 1.7
TNNQ9UQP3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
TNNQ9UQP3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC25.67■■□□□ 1.7
TNNQ9UQP3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC25.67■■□□□ 1.7
TNNQ9UQP3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TNNQ9UQP3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TNNQ9UQP3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC25.67■■□□□ 1.7
TNNQ9UQP3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC25.67■■□□□ 1.7
TNNQ9UQP3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TNNQ9UQP3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
TNNQ9UQP3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
TNNQ9UQP3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC25.66■■□□□ 1.7
TNNQ9UQP3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
TNNQ9UQP3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TNNQ9UQP3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
TNNQ9UQP3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TNNQ9UQP3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
TNNQ9UQP3 AC125437.2-201ENST00000625180 2167 ntBASIC25.66■■□□□ 1.7
TNNQ9UQP3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TNNQ9UQP3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TNNQ9UQP3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC25.66■■□□□ 1.7
TNNQ9UQP3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TNNQ9UQP3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC25.65■■□□□ 1.7
TNNQ9UQP3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TNNQ9UQP3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TNNQ9UQP3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TNNQ9UQP3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
TNNQ9UQP3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC25.65■■□□□ 1.7
TNNQ9UQP3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
TNNQ9UQP3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TNNQ9UQP3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
TNNQ9UQP3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC25.65■■□□□ 1.7
TNNQ9UQP3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
TNNQ9UQP3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TNNQ9UQP3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC25.65■■□□□ 1.7
TNNQ9UQP3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC25.65■■□□□ 1.7
TNNQ9UQP3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TNNQ9UQP3 BX119927.1-201ENST00000636596 1552 ntBASIC25.65■■□□□ 1.7
TNNQ9UQP3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
TNNQ9UQP3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.7
TNNQ9UQP3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TNNQ9UQP3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms