Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC24.59■■□□□ 1.53
ZC3H4Q9UPT8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZC3H4Q9UPT8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZC3H4Q9UPT8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
ZC3H4Q9UPT8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
ZC3H4Q9UPT8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC24.58■■□□□ 1.53
ZC3H4Q9UPT8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
ZC3H4Q9UPT8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC24.58■■□□□ 1.53
ZC3H4Q9UPT8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
ZC3H4Q9UPT8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.58■■□□□ 1.52
ZC3H4Q9UPT8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC24.58■■□□□ 1.52
ZC3H4Q9UPT8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
ZC3H4Q9UPT8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
ZC3H4Q9UPT8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
ZC3H4Q9UPT8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.58■■□□□ 1.52
ZC3H4Q9UPT8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC24.58■■□□□ 1.52
ZC3H4Q9UPT8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.58■■□□□ 1.52
ZC3H4Q9UPT8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC24.58■■□□□ 1.52
ZC3H4Q9UPT8 AP000550.4-202ENST00000639755 178 ntBASIC24.58■■□□□ 1.52
ZC3H4Q9UPT8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
ZC3H4Q9UPT8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
ZC3H4Q9UPT8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ZC3H4Q9UPT8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.57■■□□□ 1.52
ZC3H4Q9UPT8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ZC3H4Q9UPT8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ZC3H4Q9UPT8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.57■■□□□ 1.52
ZC3H4Q9UPT8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
ZC3H4Q9UPT8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC24.57■■□□□ 1.52
ZC3H4Q9UPT8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ZC3H4Q9UPT8 CR392000.1-201ENST00000624770 1228 ntBASIC24.57■■□□□ 1.52
ZC3H4Q9UPT8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
ZC3H4Q9UPT8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
ZC3H4Q9UPT8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ZC3H4Q9UPT8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
ZC3H4Q9UPT8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ZC3H4Q9UPT8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
ZC3H4Q9UPT8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.56■■□□□ 1.52
ZC3H4Q9UPT8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ZC3H4Q9UPT8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ZC3H4Q9UPT8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC24.56■■□□□ 1.52
ZC3H4Q9UPT8 SAPCD2P2-201ENST00000431719 1174 ntBASIC24.56■■□□□ 1.52
ZC3H4Q9UPT8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC24.56■■□□□ 1.52
ZC3H4Q9UPT8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC24.56■■□□□ 1.52
ZC3H4Q9UPT8 GRAMD4P8-201ENST00000605465 1115 ntBASIC24.56■■□□□ 1.52
ZC3H4Q9UPT8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC24.56■■□□□ 1.52
ZC3H4Q9UPT8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
ZC3H4Q9UPT8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
ZC3H4Q9UPT8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
ZC3H4Q9UPT8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC24.56■■□□□ 1.52
ZC3H4Q9UPT8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
ZC3H4Q9UPT8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
ZC3H4Q9UPT8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ZC3H4Q9UPT8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC24.55■■□□□ 1.52
ZC3H4Q9UPT8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
ZC3H4Q9UPT8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC24.55■■□□□ 1.52
ZC3H4Q9UPT8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
ZC3H4Q9UPT8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ZC3H4Q9UPT8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ZC3H4Q9UPT8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
ZC3H4Q9UPT8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC24.55■■□□□ 1.52
ZC3H4Q9UPT8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 AL031133.1-201ENST00000406807 723 ntBASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
ZC3H4Q9UPT8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ZC3H4Q9UPT8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ZC3H4Q9UPT8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ZC3H4Q9UPT8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC24.53■■□□□ 1.52
ZC3H4Q9UPT8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ZC3H4Q9UPT8 AL450487.1-201ENST00000426799 995 ntBASIC24.53■■□□□ 1.52
ZC3H4Q9UPT8 DUSP5P1-201ENST00000441325 1139 ntBASIC24.53■■□□□ 1.52
ZC3H4Q9UPT8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC24.53■■□□□ 1.52
ZC3H4Q9UPT8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC24.53■■□□□ 1.52
ZC3H4Q9UPT8 AC026271.3-201ENST00000571884 352 ntBASIC24.53■■□□□ 1.52
ZC3H4Q9UPT8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
ZC3H4Q9UPT8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ZC3H4Q9UPT8 DGCR10-201ENST00000609839 495 ntBASIC24.53■■□□□ 1.52
ZC3H4Q9UPT8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC24.53■■□□□ 1.52
ZC3H4Q9UPT8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ZC3H4Q9UPT8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ZC3H4Q9UPT8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.53■■□□□ 1.52
ZC3H4Q9UPT8 C9orf163-202ENST00000624034 2573 ntBASIC24.52■■□□□ 1.52
ZC3H4Q9UPT8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms