Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB4Q9UN71 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.48■□□□□ 0.71
PCDHGB4Q9UN71 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGB4Q9UN71 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGB4Q9UN71 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGB4Q9UN71 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 AC020907.5-201ENST00000624372 1936 ntBASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 AL162377.1-201ENST00000618844 1793 ntBASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGB4Q9UN71 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 AC004408.2-201ENST00000623613 2777 ntBASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGB4Q9UN71 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 AC010141.2-201ENST00000452426 721 ntBASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 DUX4L2-201ENST00000561772 1275 ntBASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 DUX4L6-201ENST00000626483 1275 ntBASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 DUX4L1-201ENST00000627662 1275 ntBASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 DUX4L8-201ENST00000629013 1275 ntBASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 DUX4L3-201ENST00000630187 1275 ntBASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 DUX4L7-201ENST00000630678 1275 ntBASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 DUX4L5-201ENST00000630834 1275 ntBASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 AP000974.1-201ENST00000623909 2387 ntBASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 AC099778.1-201ENST00000568593 1911 ntBASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGB4Q9UN71 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGB4Q9UN71 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms