Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
RIMBP3Q9UFD9 AC011506.1-201ENST00000474329 610 ntBASIC32.51■■■□□ 2.8
RIMBP3Q9UFD9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC32.51■■■□□ 2.8
RIMBP3Q9UFD9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC32.51■■■□□ 2.8
RIMBP3Q9UFD9 NFE2L3P1-201ENST00000588207 1959 ntBASIC32.51■■■□□ 2.79
RIMBP3Q9UFD9 AL441883.1-201ENST00000566170 1045 ntBASIC32.51■■■□□ 2.79
RIMBP3Q9UFD9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC32.51■■■□□ 2.79
RIMBP3Q9UFD9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC32.51■■■□□ 2.79
RIMBP3Q9UFD9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC32.51■■■□□ 2.79
RIMBP3Q9UFD9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC32.5■■■□□ 2.79
RIMBP3Q9UFD9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
RIMBP3Q9UFD9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC32.5■■■□□ 2.79
RIMBP3Q9UFD9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
RIMBP3Q9UFD9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
RIMBP3Q9UFD9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
RIMBP3Q9UFD9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
RIMBP3Q9UFD9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
RIMBP3Q9UFD9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC32.48■■■□□ 2.79
RIMBP3Q9UFD9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
RIMBP3Q9UFD9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
RIMBP3Q9UFD9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC32.48■■■□□ 2.79
RIMBP3Q9UFD9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
RIMBP3Q9UFD9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC32.48■■■□□ 2.79
RIMBP3Q9UFD9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC32.48■■■□□ 2.79
RIMBP3Q9UFD9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC32.48■■■□□ 2.79
RIMBP3Q9UFD9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
RIMBP3Q9UFD9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
RIMBP3Q9UFD9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
RIMBP3Q9UFD9 C1QL1P1-201ENST00000568105 661 ntBASIC32.48■■■□□ 2.79
RIMBP3Q9UFD9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
RIMBP3Q9UFD9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
RIMBP3Q9UFD9 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC32.47■■■□□ 2.79
RIMBP3Q9UFD9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
RIMBP3Q9UFD9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC32.47■■■□□ 2.79
RIMBP3Q9UFD9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
RIMBP3Q9UFD9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
RIMBP3Q9UFD9 MIR3652-201ENST00000579335 131 ntBASIC32.47■■■□□ 2.79
RIMBP3Q9UFD9 IFNL4P1-201ENST00000607083 540 ntBASIC32.47■■■□□ 2.79
RIMBP3Q9UFD9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
RIMBP3Q9UFD9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
RIMBP3Q9UFD9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
RIMBP3Q9UFD9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RIMBP3Q9UFD9 HMGN1P19-201ENST00000436976 333 ntBASIC32.46■■■□□ 2.79
RIMBP3Q9UFD9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RIMBP3Q9UFD9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
RIMBP3Q9UFD9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC32.45■■■□□ 2.79
RIMBP3Q9UFD9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC32.45■■■□□ 2.79
RIMBP3Q9UFD9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC32.45■■■□□ 2.79
RIMBP3Q9UFD9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC32.45■■■□□ 2.79
RIMBP3Q9UFD9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC32.45■■■□□ 2.79
RIMBP3Q9UFD9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC32.45■■■□□ 2.79
RIMBP3Q9UFD9 GXYLT1P4-201ENST00000613576 1192 ntBASIC32.45■■■□□ 2.79
RIMBP3Q9UFD9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC32.45■■■□□ 2.79
RIMBP3Q9UFD9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
RIMBP3Q9UFD9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC32.45■■■□□ 2.78
RIMBP3Q9UFD9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.78
RIMBP3Q9UFD9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
RIMBP3Q9UFD9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC32.45■■■□□ 2.78
RIMBP3Q9UFD9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC32.44■■■□□ 2.78
RIMBP3Q9UFD9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC32.44■■■□□ 2.78
RIMBP3Q9UFD9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
RIMBP3Q9UFD9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC32.44■■■□□ 2.78
RIMBP3Q9UFD9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
RIMBP3Q9UFD9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
RIMBP3Q9UFD9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
RIMBP3Q9UFD9 AL023973.1-201ENST00000624619 620 ntBASIC32.44■■■□□ 2.78
RIMBP3Q9UFD9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC32.44■■■□□ 2.78
RIMBP3Q9UFD9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC32.43■■■□□ 2.78
RIMBP3Q9UFD9 AC142381.3-201ENST00000568208 1670 ntBASIC32.43■■■□□ 2.78
RIMBP3Q9UFD9 AC092068.2-201ENST00000590491 1708 ntBASIC32.43■■■□□ 2.78
RIMBP3Q9UFD9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
RIMBP3Q9UFD9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
RIMBP3Q9UFD9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC32.43■■■□□ 2.78
RIMBP3Q9UFD9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC32.43■■■□□ 2.78
RIMBP3Q9UFD9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC32.43■■■□□ 2.78
RIMBP3Q9UFD9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC32.43■■■□□ 2.78
RIMBP3Q9UFD9 AL445675.2-201ENST00000620291 557 ntBASIC32.43■■■□□ 2.78
RIMBP3Q9UFD9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
RIMBP3Q9UFD9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC32.43■■■□□ 2.78
RIMBP3Q9UFD9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
RIMBP3Q9UFD9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
RIMBP3Q9UFD9 AC092053.2-201ENST00000640557 1818 ntBASIC32.42■■■□□ 2.78
RIMBP3Q9UFD9 AC007663.1-201ENST00000438948 1240 ntBASIC32.42■■■□□ 2.78
RIMBP3Q9UFD9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC32.42■■■□□ 2.78
RIMBP3Q9UFD9 ZNF444P1-201ENST00000559497 298 ntBASIC32.42■■■□□ 2.78
RIMBP3Q9UFD9 AC092119.3-201ENST00000612618 583 ntBASIC32.42■■■□□ 2.78
RIMBP3Q9UFD9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
RIMBP3Q9UFD9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC32.42■■■□□ 2.78
RIMBP3Q9UFD9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
RIMBP3Q9UFD9 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RIMBP3Q9UFD9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RIMBP3Q9UFD9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC32.41■■■□□ 2.78
RIMBP3Q9UFD9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
RIMBP3Q9UFD9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
RIMBP3Q9UFD9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
RIMBP3Q9UFD9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC32.41■■■□□ 2.78
RIMBP3Q9UFD9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC32.4■■■□□ 2.78
RIMBP3Q9UFD9 CKBP1-201ENST00000565489 1086 ntBASIC32.4■■■□□ 2.78
RIMBP3Q9UFD9 AC010653.2-201ENST00000623505 997 ntBASIC32.4■■■□□ 2.78
RIMBP3Q9UFD9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC32.4■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms