Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX4Q9UBX2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DUX4Q9UBX2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
DUX4Q9UBX2 BX323043.1-201ENST00000641006 1765 ntBASIC17.65■□□□□ 0.42
DUX4Q9UBX2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX4Q9UBX2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX4Q9UBX2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
DUX4Q9UBX2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX4Q9UBX2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
DUX4Q9UBX2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.65■□□□□ 0.42
DUX4Q9UBX2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.65■□□□□ 0.42
DUX4Q9UBX2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DUX4Q9UBX2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.64■□□□□ 0.42
DUX4Q9UBX2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.42
DUX4Q9UBX2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
DUX4Q9UBX2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
DUX4Q9UBX2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.64■□□□□ 0.42
DUX4Q9UBX2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 EEF1DP3-203ENST00000566025 782 ntBASIC17.64■□□□□ 0.41
DUX4Q9UBX2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.64■□□□□ 0.41
DUX4Q9UBX2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 NFIC-211ENST00000641145 8399 ntBASIC17.63■□□□□ 0.41
DUX4Q9UBX2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DUX4Q9UBX2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.62■□□□□ 0.41
DUX4Q9UBX2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.62■□□□□ 0.41
DUX4Q9UBX2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.62■□□□□ 0.41
DUX4Q9UBX2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DUX4Q9UBX2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DUX4Q9UBX2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DUX4Q9UBX2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DUX4Q9UBX2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DUX4Q9UBX2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.62■□□□□ 0.41
DUX4Q9UBX2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.62■□□□□ 0.41
DUX4Q9UBX2 AC104564.3-201ENST00000582367 638 ntBASIC17.62■□□□□ 0.41
DUX4Q9UBX2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DUX4Q9UBX2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DUX4Q9UBX2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
DUX4Q9UBX2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DUX4Q9UBX2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
DUX4Q9UBX2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DUX4Q9UBX2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DUX4Q9UBX2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.62■□□□□ 0.41
DUX4Q9UBX2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms