Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPSF2Q9P2I0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CPSF2Q9P2I0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CPSF2Q9P2I0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.24■□□□□ 0.83
CPSF2Q9P2I0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CPSF2Q9P2I0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.24■□□□□ 0.83
CPSF2Q9P2I0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.24■□□□□ 0.83
CPSF2Q9P2I0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
CPSF2Q9P2I0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPSF2Q9P2I0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPSF2Q9P2I0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 AC092720.2-201ENST00000602388 1665 ntBASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPSF2Q9P2I0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 AC245052.3-201ENST00000450182 901 ntBASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 AC120498.10-201ENST00000621827 505 ntBASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPSF2Q9P2I0 LINC02228-203ENST00000641970 1355 ntBASIC20.21■□□□□ 0.83
CPSF2Q9P2I0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF2Q9P2I0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.21■□□□□ 0.83
CPSF2Q9P2I0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF2Q9P2I0 KRT16P2-201ENST00000414673 1423 ntBASIC20.21■□□□□ 0.83
CPSF2Q9P2I0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF2Q9P2I0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF2Q9P2I0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF2Q9P2I0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF2Q9P2I0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF2Q9P2I0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.21■□□□□ 0.83
CPSF2Q9P2I0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF2Q9P2I0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF2Q9P2I0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF2Q9P2I0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPSF2Q9P2I0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 AC010141.2-201ENST00000452426 721 ntBASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 AC104187.1-201ENST00000607510 612 ntBASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPSF2Q9P2I0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CPSF2Q9P2I0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
CPSF2Q9P2I0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CPSF2Q9P2I0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CPSF2Q9P2I0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPSF2Q9P2I0 MIR638-201ENST00000385237 100 ntBASIC20.19■□□□□ 0.82
CPSF2Q9P2I0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms