Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.37■□□□□ 0.53
CLN6Q9NWW5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.37■□□□□ 0.53
CLN6Q9NWW5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLN6Q9NWW5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLN6Q9NWW5 TSPY26P-201ENST00000476365 1326 ntBASIC18.37■□□□□ 0.53
CLN6Q9NWW5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLN6Q9NWW5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CLN6Q9NWW5 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.37■□□□□ 0.53
CLN6Q9NWW5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLN6Q9NWW5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLN6Q9NWW5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLN6Q9NWW5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLN6Q9NWW5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLN6Q9NWW5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.36■□□□□ 0.53
CLN6Q9NWW5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLN6Q9NWW5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLN6Q9NWW5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLN6Q9NWW5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLN6Q9NWW5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CLN6Q9NWW5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLN6Q9NWW5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLN6Q9NWW5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLN6Q9NWW5 AC099791.1-201ENST00000416440 715 ntBASIC18.36■□□□□ 0.53
CLN6Q9NWW5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLN6Q9NWW5 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.36■□□□□ 0.53
CLN6Q9NWW5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.36■□□□□ 0.53
CLN6Q9NWW5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLN6Q9NWW5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.36■□□□□ 0.53
CLN6Q9NWW5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.36■□□□□ 0.53
CLN6Q9NWW5 AC027682.1-201ENST00000562846 899 ntBASIC18.36■□□□□ 0.53
CLN6Q9NWW5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CLN6Q9NWW5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLN6Q9NWW5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLN6Q9NWW5 AC005332.7-201ENST00000614046 2005 ntBASIC18.35■□□□□ 0.53
CLN6Q9NWW5 AC120498.9-201ENST00000339021 3867 ntBASIC18.35■□□□□ 0.53
CLN6Q9NWW5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLN6Q9NWW5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
CLN6Q9NWW5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLN6Q9NWW5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLN6Q9NWW5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLN6Q9NWW5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.35■□□□□ 0.53
CLN6Q9NWW5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.35■□□□□ 0.53
CLN6Q9NWW5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.35■□□□□ 0.53
CLN6Q9NWW5 AC008175.2-201ENST00000612840 297 ntBASIC18.35■□□□□ 0.53
CLN6Q9NWW5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.35■□□□□ 0.53
CLN6Q9NWW5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLN6Q9NWW5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLN6Q9NWW5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CLN6Q9NWW5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.35■□□□□ 0.53
CLN6Q9NWW5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLN6Q9NWW5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.35■□□□□ 0.53
CLN6Q9NWW5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLN6Q9NWW5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLN6Q9NWW5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 POU5F1P4-201ENST00000413175 1085 ntBASIC18.34■□□□□ 0.53
CLN6Q9NWW5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLN6Q9NWW5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CLN6Q9NWW5 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLN6Q9NWW5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLN6Q9NWW5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CLN6Q9NWW5 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
CLN6Q9NWW5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLN6Q9NWW5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLN6Q9NWW5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.33■□□□□ 0.53
CLN6Q9NWW5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.33■□□□□ 0.53
CLN6Q9NWW5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CLN6Q9NWW5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CLN6Q9NWW5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CLN6Q9NWW5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.33■□□□□ 0.52
CLN6Q9NWW5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLN6Q9NWW5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CLN6Q9NWW5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLN6Q9NWW5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
CLN6Q9NWW5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLN6Q9NWW5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLN6Q9NWW5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.33■□□□□ 0.52
CLN6Q9NWW5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLN6Q9NWW5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLN6Q9NWW5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CLN6Q9NWW5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms