Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 TCF3P1-201ENST00000423021 1937 ntBASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIN7CQ9NUP9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.71■□□□□ 0.27
LIN7CQ9NUP9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LIN7CQ9NUP9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIN7CQ9NUP9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.71■□□□□ 0.27
LIN7CQ9NUP9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIN7CQ9NUP9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.71■□□□□ 0.27
LIN7CQ9NUP9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.71■□□□□ 0.27
LIN7CQ9NUP9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.71■□□□□ 0.27
LIN7CQ9NUP9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.71■□□□□ 0.27
LIN7CQ9NUP9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.71■□□□□ 0.27
LIN7CQ9NUP9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
LIN7CQ9NUP9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LIN7CQ9NUP9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.71■□□□□ 0.27
LIN7CQ9NUP9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.26
LIN7CQ9NUP9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
LIN7CQ9NUP9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.71■□□□□ 0.26
LIN7CQ9NUP9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 RARRES2P11-201ENST00000635158 484 ntBASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LIN7CQ9NUP9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 AC006015.1-201ENST00000429970 570 ntBASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LIN7CQ9NUP9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.68■□□□□ 0.26
LIN7CQ9NUP9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms