Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRMT13Q9NUP7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
TRMT13Q9NUP7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.24■■□□□ 1.15
TRMT13Q9NUP7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
TRMT13Q9NUP7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.24■■□□□ 1.15
TRMT13Q9NUP7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.24■■□□□ 1.15
TRMT13Q9NUP7 MIR2861-201ENST00000636310 90 ntBASIC22.24■■□□□ 1.15
TRMT13Q9NUP7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRMT13Q9NUP7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.24■■□□□ 1.15
TRMT13Q9NUP7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRMT13Q9NUP7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.24■■□□□ 1.15
TRMT13Q9NUP7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.24■■□□□ 1.15
TRMT13Q9NUP7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
TRMT13Q9NUP7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRMT13Q9NUP7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRMT13Q9NUP7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.23■■□□□ 1.15
TRMT13Q9NUP7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRMT13Q9NUP7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRMT13Q9NUP7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRMT13Q9NUP7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
TRMT13Q9NUP7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRMT13Q9NUP7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRMT13Q9NUP7 RBM17P1-201ENST00000453646 1190 ntBASIC22.23■■□□□ 1.15
TRMT13Q9NUP7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRMT13Q9NUP7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRMT13Q9NUP7 AL121906.2-201ENST00000621597 723 ntBASIC22.23■■□□□ 1.15
TRMT13Q9NUP7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRMT13Q9NUP7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRMT13Q9NUP7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
TRMT13Q9NUP7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.23■■□□□ 1.15
TRMT13Q9NUP7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 AC079598.2-202ENST00000546624 1451 ntBASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 KRT18P35-201ENST00000510488 1269 ntBASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 ECEL1P1-201ENST00000373592 1742 ntBASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
TRMT13Q9NUP7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 NUDT16P1-203ENST00000513809 620 ntBASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 AP000525.1-201ENST00000608286 694 ntBASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 REXO1L10P-201ENST00000615707 1290 ntBASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRMT13Q9NUP7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.2■■□□□ 1.15
TRMT13Q9NUP7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 AC145285.6-201ENST00000604632 637 ntBASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRMT13Q9NUP7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.19■■□□□ 1.14
TRMT13Q9NUP7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
TRMT13Q9NUP7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
TRMT13Q9NUP7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRMT13Q9NUP7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRMT13Q9NUP7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TRMT13Q9NUP7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
TRMT13Q9NUP7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms