Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC24.68■■□□□ 1.54
UPF2Q9HAU5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
UPF2Q9HAU5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC24.68■■□□□ 1.54
UPF2Q9HAU5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.68■■□□□ 1.54
UPF2Q9HAU5 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.68■■□□□ 1.54
UPF2Q9HAU5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
UPF2Q9HAU5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
UPF2Q9HAU5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
UPF2Q9HAU5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
UPF2Q9HAU5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC24.68■■□□□ 1.54
UPF2Q9HAU5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 KRT87P-202ENST00000534226 1464 ntBASIC24.67■■□□□ 1.54
UPF2Q9HAU5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 AC012414.1-201ENST00000556676 535 ntBASIC24.67■■□□□ 1.54
UPF2Q9HAU5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 H19-201ENST00000411754 1788 ntTSL 5 BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UPF2Q9HAU5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC24.66■■□□□ 1.54
UPF2Q9HAU5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
UPF2Q9HAU5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC24.66■■□□□ 1.54
UPF2Q9HAU5 TMEM179-206ENST00000616017 1645 ntBASIC24.66■■□□□ 1.54
UPF2Q9HAU5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.66■■□□□ 1.54
UPF2Q9HAU5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC24.66■■□□□ 1.54
UPF2Q9HAU5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.66■■□□□ 1.54
UPF2Q9HAU5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
UPF2Q9HAU5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
UPF2Q9HAU5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.66■■□□□ 1.54
UPF2Q9HAU5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC24.66■■□□□ 1.54
UPF2Q9HAU5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
UPF2Q9HAU5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
UPF2Q9HAU5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
UPF2Q9HAU5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
UPF2Q9HAU5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
UPF2Q9HAU5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
UPF2Q9HAU5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
UPF2Q9HAU5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.65■■□□□ 1.54
UPF2Q9HAU5 AC079140.4-201ENST00000507448 529 ntBASIC24.65■■□□□ 1.54
UPF2Q9HAU5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.65■■□□□ 1.54
UPF2Q9HAU5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.65■■□□□ 1.54
UPF2Q9HAU5 AC098818.2-201ENST00000564925 2320 ntBASIC24.65■■□□□ 1.54
UPF2Q9HAU5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
UPF2Q9HAU5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
UPF2Q9HAU5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC24.65■■□□□ 1.54
UPF2Q9HAU5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC24.64■■□□□ 1.54
UPF2Q9HAU5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
UPF2Q9HAU5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
UPF2Q9HAU5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
UPF2Q9HAU5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
UPF2Q9HAU5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
UPF2Q9HAU5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
UPF2Q9HAU5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24.64■■□□□ 1.54
UPF2Q9HAU5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.64■■□□□ 1.54
UPF2Q9HAU5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
UPF2Q9HAU5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.64■■□□□ 1.54
UPF2Q9HAU5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
UPF2Q9HAU5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.64■■□□□ 1.54
UPF2Q9HAU5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.64■■□□□ 1.54
UPF2Q9HAU5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
UPF2Q9HAU5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC24.64■■□□□ 1.53
UPF2Q9HAU5 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
UPF2Q9HAU5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
UPF2Q9HAU5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.63■■□□□ 1.53
UPF2Q9HAU5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
UPF2Q9HAU5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC24.63■■□□□ 1.53
UPF2Q9HAU5 DPP3P2-201ENST00000416030 1696 ntBASIC24.63■■□□□ 1.53
UPF2Q9HAU5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
UPF2Q9HAU5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
UPF2Q9HAU5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
UPF2Q9HAU5 AC138907.5-202ENST00000569484 235 ntBASIC24.63■■□□□ 1.53
UPF2Q9HAU5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.63■■□□□ 1.53
UPF2Q9HAU5 TPRG1LP1-201ENST00000598702 760 ntBASIC24.63■■□□□ 1.53
UPF2Q9HAU5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
UPF2Q9HAU5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
UPF2Q9HAU5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
UPF2Q9HAU5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC24.63■■□□□ 1.53
UPF2Q9HAU5 RASA4CP-201ENST00000424092 1398 ntBASIC24.63■■□□□ 1.53
UPF2Q9HAU5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
UPF2Q9HAU5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
UPF2Q9HAU5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
UPF2Q9HAU5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
UPF2Q9HAU5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
UPF2Q9HAU5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
UPF2Q9HAU5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms