Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 AL031432.3-201ENST00000607698 485 ntBASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 MIR6084-201ENST00000622012 110 ntBASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 AL136967.2-201ENST00000623968 743 ntBASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CDC42EP4Q9H3Q1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.52■□□□□ 0.87
CDC42EP4Q9H3Q1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42EP4Q9H3Q1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CDC42EP4Q9H3Q1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.51■□□□□ 0.87
CDC42EP4Q9H3Q1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CDC42EP4Q9H3Q1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42EP4Q9H3Q1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CDC42EP4Q9H3Q1 AC004408.2-201ENST00000623613 2777 ntBASIC20.51■□□□□ 0.87
CDC42EP4Q9H3Q1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.51■□□□□ 0.87
CDC42EP4Q9H3Q1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.51■□□□□ 0.87
CDC42EP4Q9H3Q1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.51■□□□□ 0.87
CDC42EP4Q9H3Q1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.51■□□□□ 0.87
CDC42EP4Q9H3Q1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.51■□□□□ 0.87
CDC42EP4Q9H3Q1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42EP4Q9H3Q1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CDC42EP4Q9H3Q1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42EP4Q9H3Q1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CDC42EP4Q9H3Q1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.5■□□□□ 0.87
CDC42EP4Q9H3Q1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42EP4Q9H3Q1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42EP4Q9H3Q1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.5■□□□□ 0.87
CDC42EP4Q9H3Q1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42EP4Q9H3Q1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.5■□□□□ 0.87
CDC42EP4Q9H3Q1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42EP4Q9H3Q1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42EP4Q9H3Q1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CDC42EP4Q9H3Q1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.5■□□□□ 0.87
CDC42EP4Q9H3Q1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42EP4Q9H3Q1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42EP4Q9H3Q1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.5■□□□□ 0.87
CDC42EP4Q9H3Q1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CDC42EP4Q9H3Q1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42EP4Q9H3Q1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42EP4Q9H3Q1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.49■□□□□ 0.87
CDC42EP4Q9H3Q1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.49■□□□□ 0.87
CDC42EP4Q9H3Q1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42EP4Q9H3Q1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42EP4Q9H3Q1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42EP4Q9H3Q1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.49■□□□□ 0.87
CDC42EP4Q9H3Q1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.49■□□□□ 0.87
CDC42EP4Q9H3Q1 AL358852.1-201ENST00000623174 1268 ntBASIC20.49■□□□□ 0.87
CDC42EP4Q9H3Q1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42EP4Q9H3Q1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.49■□□□□ 0.87
CDC42EP4Q9H3Q1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42EP4Q9H3Q1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CDC42EP4Q9H3Q1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42EP4Q9H3Q1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42EP4Q9H3Q1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.48■□□□□ 0.87
CDC42EP4Q9H3Q1 IRS3P-201ENST00000223076 1006 ntBASIC20.48■□□□□ 0.87
CDC42EP4Q9H3Q1 AC091799.1-201ENST00000422823 811 ntBASIC20.48■□□□□ 0.87
CDC42EP4Q9H3Q1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42EP4Q9H3Q1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42EP4Q9H3Q1 AC131212.1-201ENST00000613771 668 ntBASIC20.48■□□□□ 0.87
CDC42EP4Q9H3Q1 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.48■□□□□ 0.87
CDC42EP4Q9H3Q1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42EP4Q9H3Q1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42EP4Q9H3Q1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42EP4Q9H3Q1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42EP4Q9H3Q1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 DUX4L2-201ENST00000561772 1275 ntBASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 AC110285.6-201ENST00000617652 491 ntBASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 DUX4L6-201ENST00000626483 1275 ntBASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 DUX4L1-201ENST00000627662 1275 ntBASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 DUX4L8-201ENST00000629013 1275 ntBASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 DUX4L3-201ENST00000630187 1275 ntBASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 DUX4L7-201ENST00000630678 1275 ntBASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 DUX4L5-201ENST00000630834 1275 ntBASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.47■□□□□ 0.87
CDC42EP4Q9H3Q1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms