Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
NELFAQ9H3P2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NELFAQ9H3P2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NELFAQ9H3P2 AL355472.2-201ENST00000422958 438 ntBASIC17.95■□□□□ 0.46
NELFAQ9H3P2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.95■□□□□ 0.46
NELFAQ9H3P2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.95■□□□□ 0.46
NELFAQ9H3P2 CYP2T3P-201ENST00000601990 817 ntBASIC17.95■□□□□ 0.46
NELFAQ9H3P2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
NELFAQ9H3P2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NELFAQ9H3P2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.95■□□□□ 0.46
NELFAQ9H3P2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NELFAQ9H3P2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NELFAQ9H3P2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.95■□□□□ 0.46
NELFAQ9H3P2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NELFAQ9H3P2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NELFAQ9H3P2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
NELFAQ9H3P2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NELFAQ9H3P2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NELFAQ9H3P2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.95■□□□□ 0.46
NELFAQ9H3P2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NELFAQ9H3P2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 MCRIP2P1-201ENST00000394346 511 ntBASIC17.94■□□□□ 0.46
NELFAQ9H3P2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 KRT8P36-201ENST00000489121 1440 ntBASIC17.94■□□□□ 0.46
NELFAQ9H3P2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NELFAQ9H3P2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NELFAQ9H3P2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.93■□□□□ 0.46
NELFAQ9H3P2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NELFAQ9H3P2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NELFAQ9H3P2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NELFAQ9H3P2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NELFAQ9H3P2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NELFAQ9H3P2 AC087633.2-202ENST00000565166 1439 ntBASIC17.93■□□□□ 0.46
NELFAQ9H3P2 MIPEPP3-201ENST00000412105 444 ntBASIC17.93■□□□□ 0.46
NELFAQ9H3P2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.93■□□□□ 0.46
NELFAQ9H3P2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.93■□□□□ 0.46
NELFAQ9H3P2 AL138781.1-201ENST00000566567 1274 ntBASIC17.93■□□□□ 0.46
NELFAQ9H3P2 AC142086.2-201ENST00000569753 217 ntBASIC17.93■□□□□ 0.46
NELFAQ9H3P2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.93■□□□□ 0.46
NELFAQ9H3P2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.93■□□□□ 0.46
NELFAQ9H3P2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
NELFAQ9H3P2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.93■□□□□ 0.46
NELFAQ9H3P2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NELFAQ9H3P2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NELFAQ9H3P2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.93■□□□□ 0.46
NELFAQ9H3P2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NELFAQ9H3P2 KRT17P1-201ENST00000399211 1546 ntBASIC17.93■□□□□ 0.46
NELFAQ9H3P2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NELFAQ9H3P2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 SLC29A4P1-201ENST00000398760 971 ntBASIC17.92■□□□□ 0.46
NELFAQ9H3P2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 AC098934.4-201ENST00000564127 592 ntBASIC17.92■□□□□ 0.46
NELFAQ9H3P2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NELFAQ9H3P2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NELFAQ9H3P2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms